Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC011406.1-201ENST00000512440 370 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 RNU6-922P-201ENST00000516753 99 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 AC090888.2-201ENST00000559765 1144 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 MTND4LP25-201ENST00000570218 163 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 MIR5695-201ENST00000579717 85 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 AC144521.1-201ENST00000607148 956 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 AC021506.2-201ENST00000612354 169 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 AC012409.4-201ENST00000612923 249 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.34□□□□□ -2.36
TRAV27A0A087WT01 MTND4P14-201ENST00000435799 1354 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 RNU6-1026P-201ENST00000384465 108 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AL136310.1-201ENST00000404926 654 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 RNA5SP201-201ENST00000410316 124 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 RNU6-1245P-201ENST00000411130 106 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 HIGD1AP15-201ENST00000416198 280 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 C1DP2-201ENST00000418167 426 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AC245047.7-201ENST00000440265 293 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AC243964.1-201ENST00000441814 261 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 BTBD7P2-201ENST00000441962 620 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AC007327.1-201ENST00000447461 264 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AC098869.1-201ENST00000481627 292 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AC091435.1-201ENST00000505442 584 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 RNA5SP255-201ENST00000516370 107 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AP001893.2-201ENST00000526949 202 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AL137100.2-201ENST00000555786 315 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 MIR5000-201ENST00000577717 103 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AC008752.3-201ENST00000588113 712 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AL929325.1-201ENST00000603096 117 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AL078603.1-201ENST00000603824 313 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AL353765.1-201ENST00000605514 183 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 AC006386.1-201ENST00000619436 415 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 MIR338-201ENST00000636369 67 ntBASIC0.33□□□□□ -2.36
TRAV27A0A087WT01 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 RNU6-433P-201ENST00000363216 104 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 U3.9-201ENST00000363823 204 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 RNU6-105P-201ENST00000363909 104 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 RNU6-43P-201ENST00000384302 107 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 RNU6-1235P-201ENST00000384559 107 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 RNU6-298P-201ENST00000390888 96 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AC244670.1-201ENST00000436879 112 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AC073614.1-201ENST00000438690 650 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 MTND5P2-201ENST00000442927 1142 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 MTCYBP1-201ENST00000454315 1119 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 C1DP4-201ENST00000455429 424 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 RNU6-498P-201ENST00000459468 107 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AC105758.1-201ENST00000506038 399 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AC107934.1-201ENST00000522215 217 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AC068587.4-201ENST00000533893 186 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 TPRKBP2-201ENST00000565969 475 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AL606834.3-201ENST00000602615 496 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AL031281.1-201ENST00000604049 488 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AL353149.1-201ENST00000610667 244 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 AC126544.2-201ENST00000625174 749 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 U4.7-201ENST00000638126 106 ntBASIC0.32□□□□□ -2.36
TRAV27A0A087WT01 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 SNORA63.3-201ENST00000362682 132 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 Y_RNA.132-201ENST00000363421 102 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 Y_RNA.224-201ENST00000364308 111 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 RNU6-418P-201ENST00000384035 107 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 EEF1A1P40-201ENST00000412883 573 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AC010975.2-201ENST00000427781 588 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 CALM2P2-201ENST00000428512 440 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 MTCO3P18-201ENST00000440206 761 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 MTCO3P7-201ENST00000510008 774 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 RNU7-51P-201ENST00000516560 62 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AC092451.2-201ENST00000538746 658 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AC018659.1-201ENST00000551083 169 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AC091489.2-201ENST00000566263 604 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AL121895.2-201ENST00000619558 447 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 SNORD3E-202ENST00000627253 216 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AC006927.4-201ENST00000639187 543 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 ELL2P3-201ENST00000457883 1602 ntBASIC0.31□□□□□ -2.36
TRAV27A0A087WT01 AC099786.3-201ENST00000565735 1410 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RNU1-76P-201ENST00000362903 159 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 U3.8-201ENST00000363675 217 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RNU6-371P-201ENST00000364283 108 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RNU4-56P-201ENST00000364700 142 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 SNORA72.2-201ENST00000365028 127 ntBASIC0.3□□□□□ -2.36
TRAV27A0A087WT01 RNU6-945P-201ENST00000383947 107 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms