Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 RNU6-1113P-201ENST00000384348 107 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-1228P-201ENST00000391014 107 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 CYCSP48-201ENST00000417124 323 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 AC112220.1-201ENST00000434628 355 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 MTATP8P2-201ENST00000435212 202 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 RNU7-23P-201ENST00000459465 62 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 AC136628.3-201ENST00000521868 290 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 MIR6891-201ENST00000618788 93 ntBASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
DNMT3AQ9Y6K1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 RNA5SP447-201ENST00000363749 119 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 SNORA56-201ENST00000383966 129 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-1310P-201ENST00000384153 107 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 EI24P2-201ENST00000397776 1076 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 SNORA11F-201ENST00000408237 128 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 SNORA19.1-201ENST00000410656 129 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 AC019205.3-201ENST00000424573 156 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 AC245047.4-201ENST00000433189 144 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 AC011998.1-201ENST00000433403 117 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 RN7SL459P-201ENST00000481078 302 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 RN7SL810P-201ENST00000493031 276 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 RN7SL812P-201ENST00000493791 279 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 Y_RNA.690-201ENST00000516603 95 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 TRAV8-5-201ENST00000537369 341 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 AL356575.1-201ENST00000603008 283 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 AC079587.1-201ENST00000603846 277 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 AC140113.4-201ENST00000622087 222 ntBASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DNMT3AQ9Y6K1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 AC007496.3-201ENST00000624987 3443 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 RNA5SP307-201ENST00000362863 116 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 Y_RNA.73-201ENST00000362910 113 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-309P-201ENST00000364573 106 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 Y_RNA.342-201ENST00000365352 113 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-1276P-201ENST00000365372 104 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 MIR526A2-201ENST00000390198 65 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 Y_RNA.625-201ENST00000411256 107 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 AP000705.1-201ENST00000454567 350 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 snoU13.6-201ENST00000458785 104 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 RPS23P7-201ENST00000466210 444 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 AC011276.1-201ENST00000469688 323 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-436P-201ENST00000516171 114 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 RNA5SP367-201ENST00000516557 118 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 ATP5J2P6-201ENST00000565203 266 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 SCN1A-220ENST00000641603 12506 ntBASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DNMT3AQ9Y6K1 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 Y_RNA.179-201ENST00000363844 90 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 RNU6-324P-201ENST00000363957 106 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 SNORA72.4-201ENST00000384174 132 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 MIR708-201ENST00000390708 88 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 AL355497.1-201ENST00000406262 551 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 MIR320B2-201ENST00000408479 138 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 RPL23AP70-201ENST00000483361 460 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 IGKV1-22-201ENST00000524313 326 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 uc_338.13-201ENST00000618243 179 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 AL035470.1-201ENST00000622571 220 ntBASIC4.36□□□□□ -1.71
DNMT3AQ9Y6K1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms