Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-960P-201ENST00000364056 120 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-723P-201ENST00000383973 107 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 RNU2-3P-201ENST00000410144 191 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 TRBVA-201ENST00000498804 316 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 AC010587.2-201ENST00000511727 448 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-496P-201ENST00000516145 99 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 SNORA43.2-201ENST00000516652 128 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-165P-201ENST00000517170 99 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 AC136932.1-201ENST00000574771 208 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 AC008945.2-201ENST00000606056 604 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 AC072039.2-201ENST00000608883 439 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 AC092106.3-201ENST00000611308 722 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 AL512506.1-201ENST00000613918 449 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 ELL2P3-201ENST00000457883 1602 ntBASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SCN10AQ9Y5Y9 RNA5SP327-201ENST00000362494 101 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-511P-201ENST00000363496 107 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-621P-201ENST00000364752 109 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 RPS27P22-201ENST00000478056 241 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AP003072.2-201ENST00000527756 676 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AC090578.1-201ENST00000604955 591 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 MIR3976-201ENST00000606807 139 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AC120349.3-201ENST00000624377 529 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 MIR200A-201ENST00000384875 90 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 MRPL35P1-201ENST00000404272 572 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 RNU2-39P-201ENST00000410604 198 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 ADI1P3-201ENST00000549509 470 ntBASIC0.61□□□□□ -2.31
SCN10AQ9Y5Y9 AC073343.1-201ENST00000328239 651 ntBASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 MIR544A-201ENST00000384855 91 ntBASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 AL606490.4-201ENST00000423117 127 ntBASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 PRPS1P1-201ENST00000445305 876 ntBASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 MTND2P7-201ENST00000521337 640 ntBASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 AC115990.1-201ENST00000526957 301 ntBASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 AL353149.1-201ENST00000610667 244 ntBASIC0.6□□□□□ -2.31
SCN10AQ9Y5Y9 SNORD56.1-201ENST00000362913 68 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 COX6CP10-201ENST00000416832 224 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 RAB28P5-201ENST00000427490 651 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 AC098934.3-201ENST00000430450 190 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 AC074344.1-201ENST00000512823 224 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 AC090517.1-201ENST00000569307 266 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 BNIP3P16-201ENST00000589779 534 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 AL590229.1-201ENST00000603497 542 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 BX284668.6-201ENST00000606899 438 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 AC024940.5-201ENST00000622889 474 ntBASIC0.59□□□□□ -2.31
SCN10AQ9Y5Y9 RNU6-1065P-201ENST00000384513 106 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 RAP1BP3-201ENST00000407180 549 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 RPS26P45-201ENST00000471748 340 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 RNA5SP503-201ENST00000517047 117 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 AC107934.1-201ENST00000522215 217 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 MIR544B-201ENST00000582372 78 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 MTCO2P2-201ENST00000591258 225 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 AL592221.1-201ENST00000605266 382 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 AC105129.3-201ENST00000605455 485 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 AC144521.1-201ENST00000607148 956 ntBASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.59□□□□□ -2.32
SCN10AQ9Y5Y9 AL159152.1-201ENST00000635019 2587 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 Y_RNA.412-201ENST00000384001 104 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 MIR10A-201ENST00000385043 110 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 RNA5SP111-201ENST00000411386 101 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 RPL22P18-201ENST00000417197 377 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 MTCO3P29-201ENST00000432119 779 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 RNA5SP395-201ENST00000516567 118 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 AC004492.1-201ENST00000607036 742 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 AC131235.4-201ENST00000609288 620 ntBASIC0.58□□□□□ -2.32
SCN10AQ9Y5Y9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.57□□□□□ -2.32
SCN10AQ9Y5Y9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SCN10AQ9Y5Y9 RNU4-15P-201ENST00000362613 141 ntBASIC0.57□□□□□ -2.32
SCN10AQ9Y5Y9 RNU1-96P-201ENST00000364163 162 ntBASIC0.57□□□□□ -2.32
SCN10AQ9Y5Y9 RNA5SP201-201ENST00000410316 124 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms