Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 snoU13.6-201ENST00000458785 104 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 snoU13.30-201ENST00000458951 104 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AP004217.1-201ENST00000480579 346 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AC132942.1-201ENST00000486753 483 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 RPL30P10-201ENST00000488148 337 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 RN7SL283P-201ENST00000489055 303 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU7-175P-201ENST00000515915 61 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AC093027.1-201ENST00000546698 429 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 MIR4795-201ENST00000584182 89 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AC023043.3-201ENST00000593113 385 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AL359697.1-201ENST00000624879 587 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 AC008264.2-201ENST00000610193 3731 ntBASIC3.26□□□□□ -1.89
COL4A3BPQ9Y5P4 SNORA9.2-201ENST00000365361 133 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-546P-201ENST00000383991 107 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-851P-201ENST00000384565 107 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-310P-201ENST00000384655 107 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-1093P-201ENST00000391194 107 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 SNORA75.6-201ENST00000391318 127 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 MIR1294-201ENST00000408503 142 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RN7SKP58-201ENST00000411010 305 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 AC112220.1-201ENST00000434628 355 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 AC244505.4-201ENST00000434905 287 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 SSXP5-201ENST00000443473 287 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 SNORD19B-201ENST00000459623 84 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 AC093303.1-201ENST00000514549 295 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 SCARNA16.2-201ENST00000516520 172 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RNA5SP384-201ENST00000516615 116 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-1213P-201ENST00000517075 94 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.718-201ENST00000517110 102 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 HSPE1P18-201ENST00000517602 280 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 CBX3P7-201ENST00000532876 502 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RPL17P51-201ENST00000605218 238 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 AC126177.8-201ENST00000618339 1015 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 MTND4LP32-201ENST00000636111 270 ntBASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.25□□□□□ -1.89
COL4A3BPQ9Y5P4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-1072P-201ENST00000384703 107 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-443P-201ENST00000384780 107 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 MIR153-2-201ENST00000385225 87 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-700P-201ENST00000391043 107 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.646-201ENST00000410980 101 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU2-32P-201ENST00000411193 191 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 AC009238.1-201ENST00000442165 424 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 AC009237.6-201ENST00000446969 424 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-264P-201ENST00000517134 104 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 AC104581.2-201ENST00000572227 430 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 MIR7106-201ENST00000612419 65 ntBASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.24□□□□□ -1.89
COL4A3BPQ9Y5P4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 RNY1P16-201ENST00000363063 111 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-944P-201ENST00000364023 107 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 SNORD32B-201ENST00000364460 84 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-378P-201ENST00000384324 107 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 RNU6-331P-201ENST00000384724 107 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 RPL19P1-201ENST00000411635 428 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 AL135938.1-201ENST00000443141 297 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 AC022616.8-201ENST00000533569 253 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 AC096644.4-201ENST00000563417 2912 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 AL365361.1-201ENST00000566942 3481 ntBASIC3.23□□□□□ -1.89
COL4A3BPQ9Y5P4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.48-201ENST00000362710 103 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.111-201ENST00000363248 100 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 SNORA51.4-201ENST00000364993 124 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.431-201ENST00000384086 102 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 MIR32-201ENST00000384965 70 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 MIR320B2-201ENST00000408479 138 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 AP000705.1-201ENST00000454567 350 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 ELOCP24-201ENST00000456370 334 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 Y_RNA.706-201ENST00000516933 99 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 AC026470.2-201ENST00000561492 181 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 AL356575.1-201ENST00000603008 283 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 AC100812.1-201ENST00000607622 580 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 AC005014.2-201ENST00000607795 599 ntBASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
COL4A3BPQ9Y5P4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms