Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.106-201ENST00000363189 100 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 U3.9-201ENST00000363823 204 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-280P-201ENST00000364145 104 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.424-201ENST00000384063 103 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AL513477.1-202ENST00000417061 214 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 USP9YP16-201ENST00000430287 407 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AL160004.2-201ENST00000432935 350 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 Z75741.1-201ENST00000446793 314 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 USP9YP23-201ENST00000455085 407 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 CYP2C59P-201ENST00000457790 269 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU7-87P-201ENST00000459343 62 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AC007215.1-201ENST00000464893 276 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 TOMM22P6-201ENST00000465035 409 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 SNORA25.11-201ENST00000515935 105 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU4-77P-201ENST00000516692 156 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR2276-201ENST00000516886 89 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AC026333.2-201ENST00000542164 106 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 EIF4A1P12-201ENST00000551910 141 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 HSBP1P1-201ENST00000555205 166 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AC105245.1-201ENST00000581934 244 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 AC008121.3-201ENST00000618726 433 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR5739-201ENST00000619803 80 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR4272-201ENST00000635924 64 ntBASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
PCDHGA9Q9Y5G4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 U8.10-201ENST00000384260 133 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-1160P-201ENST00000384546 104 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-1093P-201ENST00000391194 107 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AL118496.2-201ENST00000448300 230 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AC109925.1-201ENST00000478069 331 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AC026470.2-201ENST00000561492 181 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR3199-1-201ENST00000582434 88 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 SNRPGP20-201ENST00000604477 205 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 PCGEM1.1-201ENST00000613431 131 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 AC040896.1-201ENST00000613819 479 ntBASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
PCDHGA9Q9Y5G4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.216-201ENST00000364205 93 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 RNA5SP240-201ENST00000365355 128 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR606-201ENST00000384851 96 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU1-139P-201ENST00000391307 165 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 AL357075.1-201ENST00000404107 726 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 RNA5SP201-201ENST00000410316 124 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 HMGB3P2-201ENST00000411913 584 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 RPL30P4-201ENST00000429309 333 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 AC140059.1-201ENST00000489238 361 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 AC023141.11-201ENST00000508864 202 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-1114P-201ENST00000516022 107 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-58P-201ENST00000517143 103 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 RNA5SP380-201ENST00000517190 98 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 EIF4BP1-201ENST00000554881 351 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 LARP7P3-201ENST00000579888 337 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 AL162274.2-201ENST00000614406 332 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 AL132822.1-201ENST00000617063 513 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 AC080128.1-201ENST00000474389 1917 ntBASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PCDHGA9Q9Y5G4 MTND5P16-201ENST00000460269 1703 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU4-15P-201ENST00000362613 141 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.132-201ENST00000363421 102 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.145-201ENST00000363527 102 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.358-201ENST00000365491 99 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 SNORD14.1-201ENST00000365609 90 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-245P-201ENST00000384020 107 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 MIR218-1-201ENST00000384999 110 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.1□□□□□ -1.91
PCDHGA9Q9Y5G4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms