Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TAF9P1-201ENST00000445421 515 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 Z73417.1-201ENST00000447373 778 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 TAF9P2-201ENST00000454958 515 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 RNU7-14P-201ENST00000459331 62 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC090572.1-201ENST00000519251 160 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC021231.3-201ENST00000558497 370 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 CYP4A27P-201ENST00000567218 190 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 MIR3941-201ENST00000582572 103 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 VN1R80P-201ENST00000597126 338 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 BNIP3P8-201ENST00000597863 560 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 AC011155.2-201ENST00000623202 216 ntBASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
RHBDD3Q9Y3P4 RNU1-76P-201ENST00000362903 159 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 RNU4-28P-201ENST00000364739 141 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 RNU4-62P-201ENST00000410125 130 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 RNU4-46P-201ENST00000410818 138 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 SNAP23P1-201ENST00000433229 246 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AC015922.2-201ENST00000435593 184 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 RNU1-123P-201ENST00000458950 160 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AC004223.1-201ENST00000479840 271 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-1178P-201ENST00000516674 107 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AC109446.2-201ENST00000567872 497 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AC098848.2-201ENST00000588023 330 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AC107304.1-201ENST00000604229 296 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AC064807.4-201ENST00000607201 407 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AC005520.5-201ENST00000613926 164 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 AL353997.5-201ENST00000618886 171 ntBASIC1.13□□□□□ -2.23
RHBDD3Q9Y3P4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-862P-201ENST00000362804 105 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 RNU1-96P-201ENST00000364163 162 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 Y_RNA.367-201ENST00000365544 101 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 MIR454-201ENST00000390180 115 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 GPR143P-201ENST00000434155 205 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AL121601.2-201ENST00000438019 707 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 GTF2IP13-201ENST00000438487 386 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 UBE2D3P4-201ENST00000441973 436 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 RNU7-182P-201ENST00000459009 62 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 RPS23P5-201ENST00000495419 428 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 MTCO3P7-201ENST00000510008 774 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 MTCO3P28-201ENST00000513351 515 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 FABP5P5-201ENST00000515537 406 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-1098P-201ENST00000516772 96 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 SCARNA1-201ENST00000517138 166 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AC090821.2-201ENST00000523552 176 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AC084364.2-201ENST00000546924 395 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AP003465.2-201ENST00000602571 373 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AL512598.1-201ENST00000610158 273 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AL353149.1-201ENST00000610667 244 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 AL359697.1-201ENST00000624879 587 ntBASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-552P-201ENST00000362869 119 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-1097P-201ENST00000363586 107 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 SNORA12.2-201ENST00000391040 156 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 AL117339.3-201ENST00000418733 162 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 Z99497.1-201ENST00000421282 135 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 SNX2P2-201ENST00000424553 323 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 AL596276.1-201ENST00000434465 418 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 AC104850.1-201ENST00000435940 476 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 EPS15P1-201ENST00000448836 336 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 RN7SKP210-201ENST00000459176 261 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 snoU13.27-201ENST00000459278 104 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 RAP1BP2-201ENST00000478270 544 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 AL163195.1-201ENST00000496941 348 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 RNU2-34P-201ENST00000516534 121 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-856P-201ENST00000516959 98 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 RNU2-46P-201ENST00000517038 113 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-1220P-201ENST00000517126 108 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 AC019176.1-201ENST00000518519 225 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 AC022418.1-201ENST00000624118 445 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 SEPT14P19-203ENST00000633205 211 ntBASIC1.11□□□□□ -2.23
RHBDD3Q9Y3P4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 RNU6-428P-201ENST00000362942 107 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 RNA5SP99-201ENST00000364020 114 ntBASIC1.1□□□□□ -2.23
RHBDD3Q9Y3P4 SNORA72.2-201ENST00000365028 127 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms