Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIR3202-2-201ENST00000635980 79 ntBASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PDZRN3Q9UPQ7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 SNORA72.4-201ENST00000384174 132 ntBASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 MIR34B-201ENST00000385076 84 ntBASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 EIF1AXP1-201ENST00000419267 435 ntBASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 AC073261.1-201ENST00000429409 121 ntBASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 AC010999.1-201ENST00000611856 324 ntBASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 AC009093.8-201ENST00000641769 292 ntBASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
PDZRN3Q9UPQ7 FAM91A3P-201ENST00000456826 2544 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 SNORD115-8-201ENST00000363856 82 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 SNORD115-38-201ENST00000365037 82 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 Y_RNA.498-201ENST00000384460 102 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 SNORD12C-201ENST00000386307 89 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 U3.19-201ENST00000390893 196 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 SSXP9-201ENST00000417503 292 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 AC245047.4-201ENST00000433189 144 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 AC091874.1-201ENST00000511402 339 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 RNU1-95P-201ENST00000516357 160 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 RNU1-128P-201ENST00000516704 160 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 MIR5684-201ENST00000585074 65 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 AC012314.7-201ENST00000619693 93 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 MIR4275-201ENST00000636486 87 ntBASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.09□□□□□ -1.59
PDZRN3Q9UPQ7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDZRN3Q9UPQ7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.6
PDZRN3Q9UPQ7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PDZRN3Q9UPQ7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.09□□□□□ -1.6
PDZRN3Q9UPQ7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 AC087588.1-201ENST00000462203 316 ntBASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 RPL30P12-201ENST00000474666 353 ntBASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 HIGD1AP3-201ENST00000515857 278 ntBASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 SNORA31.22-201ENST00000517204 135 ntBASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 IGKV2D-36-201ENST00000518643 226 ntBASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 MIR5688-201ENST00000580619 83 ntBASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 MIR4727-201ENST00000622232 55 ntBASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 AC241585.2-209ENST00000638217 143 ntBASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PDZRN3Q9UPQ7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 MIR30B-201ENST00000384850 88 ntBASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 U3.40-201ENST00000408706 208 ntBASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 RPL23AP70-201ENST00000483361 460 ntBASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 ATP5EP1-201ENST00000510257 156 ntBASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 RPL30P11-203ENST00000598995 310 ntBASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 MIR6868-201ENST00000611215 58 ntBASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 AL590808.1-201ENST00000618696 141 ntBASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 AC024581.2-201ENST00000619986 252 ntBASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PDZRN3Q9UPQ7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AC080128.1-201ENST00000474389 1917 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RNA5SP502-201ENST00000362694 119 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-78P-201ENST00000362897 107 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-508P-201ENST00000363231 103 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-873P-201ENST00000363833 107 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-105P-201ENST00000363909 104 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AL603914.1-201ENST00000401964 204 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 SNORA3.3-201ENST00000408712 125 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 NDUFS5P4-201ENST00000412983 318 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RN7SL323P-201ENST00000494712 295 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-109P-201ENST00000516364 107 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RNA5SP281-201ENST00000516504 135 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 RNU6-184P-201ENST00000516514 107 ntBASIC5.06□□□□□ -1.6
PDZRN3Q9UPQ7 AC025647.1-201ENST00000517879 253 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms