Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MIR934-201ENST00000401241 83 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AL049545.1-201ENST00000401856 572 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 MTCYBP2-201ENST00000407745 171 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 RNU6-174P-201ENST00000410406 106 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 RN7SKP61-201ENST00000410642 295 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 BTF3P4-201ENST00000418852 495 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AC078809.1-201ENST00000427601 140 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.58□□□□□ -2.16
CDH9Q9ULB4 RPS6P15-201ENST00000431996 751 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH9Q9ULB4 SCARNA18-201ENST00000459004 134 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 RN7SKP210-201ENST00000459176 261 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AC005741.1-201ENST00000511094 432 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 SNORA31.16-201ENST00000516773 139 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 SNORA44.1-201ENST00000517031 108 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.58□□□□□ -2.16
CDH9Q9ULB4 RSL24D1P11-201ENST00000591045 491 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 VN1R80P-201ENST00000597126 338 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 BNIP3P10-201ENST00000605360 577 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AC002044.1-201ENST00000606707 158 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDH9Q9ULB4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CDH9Q9ULB4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CDH9Q9ULB4 LINC02555-201ENST00000563933 1951 ntBASIC1.58□□□□□ -2.16
CDH9Q9ULB4 MIR30A-201ENST00000385092 71 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 SNAP23P1-201ENST00000433229 246 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AC244505.5-201ENST00000443639 207 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 RNU1-131P-201ENST00000458943 161 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AC022880.1-201ENST00000534017 973 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 HSPE1P4-201ENST00000550617 308 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.57□□□□□ -2.16
CDH9Q9ULB4 MTCO3P23-201ENST00000561363 289 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.57□□□□□ -2.16
CDH9Q9ULB4 AC005786.1-201ENST00000588553 154 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 Z94722.1-201ENST00000604328 474 ntBASIC1.57□□□□□ -2.16
CDH9Q9ULB4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 RNU6-266P-201ENST00000364225 107 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 RNA5SP201-201ENST00000410316 124 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 RNU2-29P-201ENST00000410423 189 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AP1B1P2-201ENST00000416196 106 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 NCOR1P3-201ENST00000420479 303 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AL031274.1-201ENST00000450334 232 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC027575.1-201ENST00000481064 460 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC098862.1-201ENST00000504991 413 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 MTND3P12-201ENST00000559068 328 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC012507.3-201ENST00000603556 477 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC022079.1-201ENST00000621546 602 ntBASIC1.56□□□□□ -2.16
CDH9Q9ULB4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CDH9Q9ULB4 AC092268.1-201ENST00000342691 405 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 SNORD116-8-201ENST00000384365 95 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 SNORA26.3-201ENST00000391119 136 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 RNU2-9P-201ENST00000410194 145 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC123900.1-201ENST00000420390 96 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 MTCO2P34-201ENST00000421994 607 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH9Q9ULB4 RPL23AP95-201ENST00000426806 265 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.55□□□□□ -2.16
CDH9Q9ULB4 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC130509.1-201ENST00000464158 433 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AK3P2-201ENST00000507976 429 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC026407.1-201ENST00000518369 204 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC103996.1-201ENST00000555468 102 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 SUB1P2-201ENST00000556401 297 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 SUB1P4-201ENST00000566062 339 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC109446.1-201ENST00000566172 220 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AGGF1P4-201ENST00000568249 801 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH9Q9ULB4 MIR3923-201ENST00000579521 83 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 MIR3941-201ENST00000582572 103 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH9Q9ULB4 NIFKP6-201ENST00000598115 845 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AP001596.2-201ENST00000608410 312 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC072046.2-201ENST00000618366 268 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.55□□□□□ -2.16
CDH9Q9ULB4 AL390237.1-201ENST00000404226 1415 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms