Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 RNU1-33P-201ENST00000364249 162 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 RNU6-968P-201ENST00000384076 107 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 RNU6-843P-201ENST00000384454 104 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 Y_RNA.504-201ENST00000384481 104 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 RNA5SP213-201ENST00000391031 106 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 RPS4XP3-201ENST00000398541 413 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 RNA5SP229-201ENST00000410809 99 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AC098614.2-201ENST00000426040 255 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AC109925.1-201ENST00000478069 331 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AF186996.7-201ENST00000492781 209 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 SNORA70.16-201ENST00000516390 95 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 SNORA70.24-201ENST00000517233 118 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 MIR3921-201ENST00000577308 85 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AC136601.2-201ENST00000604356 474 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AL161756.2-201ENST00000604597 246 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AC011921.3-201ENST00000605540 361 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 RPL23AP88-201ENST00000605759 454 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 SCARNA4-201ENST00000629045 128 ntBASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
PACSIN3Q9UKS6 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 RNU4-35P-201ENST00000362588 141 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 RNU6-527P-201ENST00000363425 104 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 RNA5SP267-201ENST00000364893 126 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 Z98749.2-208ENST00000381646 500 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 SNORA46-201ENST00000384762 135 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 MIR487A-201ENST00000385009 80 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 UBA52P6-201ENST00000399822 382 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 SNORD12B-201ENST00000410433 91 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 RPS15AP7-201ENST00000439294 405 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 AC098831.1-201ENST00000440661 216 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 TMSB4XP3-201ENST00000445144 114 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 SSXP4-201ENST00000451349 245 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 RPL21P104-201ENST00000464143 478 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 RPS29P26-201ENST00000477483 171 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 SNORA43.2-201ENST00000516652 128 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 RNA5SP468-201ENST00000516782 93 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 RNU2-31P-201ENST00000516954 155 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 MTND5P41-201ENST00000517498 206 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 CYCSP39-201ENST00000565821 309 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 AC048347.1-201ENST00000624621 427 ntBASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.11□□□□□ -1.91
PACSIN3Q9UKS6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 RNU6-1020P-201ENST00000363684 107 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 SNORD113-1-201ENST00000365321 69 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 RNU6-326P-201ENST00000365480 107 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 Y_RNA.418-201ENST00000384029 102 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 Y_RNA.569-201ENST00000384749 103 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 MIR325-201ENST00000385260 98 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 SNORD17-201ENST00000390930 237 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AL356867.1-201ENST00000429623 299 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 SNRPEP9-201ENST00000436794 238 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 RPS4XP13-201ENST00000483219 789 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AC093663.1-201ENST00000497190 394 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 RNY3P16-201ENST00000516338 101 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AL162424.1-201ENST00000602325 221 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AL078605.1-201ENST00000603529 500 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AL713866.2-201ENST00000603579 219 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 Z83818.1-201ENST00000603584 150 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AL162713.1-201ENST00000604480 262 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 SNORD113-5-201ENST00000607261 78 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AP002826.1-201ENST00000608835 315 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 MIR8058-201ENST00000615737 89 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 AL359693.1-201ENST00000614959 2407 ntBASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.1□□□□□ -1.91
PACSIN3Q9UKS6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PACSIN3Q9UKS6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PACSIN3Q9UKS6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.09□□□□□ -1.91
PACSIN3Q9UKS6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PACSIN3Q9UKS6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PACSIN3Q9UKS6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.09□□□□□ -1.91
PACSIN3Q9UKS6 RNU6-50P-201ENST00000362356 103 ntBASIC3.09□□□□□ -1.91
PACSIN3Q9UKS6 RNU6-1286P-201ENST00000383871 107 ntBASIC3.09□□□□□ -1.91
PACSIN3Q9UKS6 RNU6-741P-201ENST00000383889 107 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms