Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 SNORD60.2-201ENST00000516883 86 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC069113.1-201ENST00000517763 267 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AP002963.1-201ENST00000530590 184 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 EIF4A1P12-201ENST00000551910 141 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AL160236.1-201ENST00000556317 195 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 MIR4513-201ENST00000581077 86 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC069114.2-201ENST00000604699 304 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AL360219.1-201ENST00000610230 366 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC083806.3-201ENST00000614016 455 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 FGF7P2-201ENST00000332473 296 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNU4-21P-201ENST00000362802 126 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNU4-13P-201ENST00000364019 141 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNU6-60P-201ENST00000364792 103 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 SNORD31B-201ENST00000364977 69 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNU6-282P-201ENST00000365357 103 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNU6-203P-201ENST00000384038 104 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNU6-297P-201ENST00000384636 107 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNY3P10-201ENST00000384764 102 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 MT-TH-201ENST00000387441 69 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 SNORA12.2-201ENST00000391040 156 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNU2-7P-201ENST00000410794 178 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 AL365203.2-201ENST00000423444 196 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 AC015922.2-201ENST00000435593 184 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 SNRPGP9-201ENST00000456025 225 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 SCARNA18-201ENST00000459004 134 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNA5SP269-201ENST00000459032 137 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 MTCO3P28-201ENST00000513351 515 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 RNU6-1098P-201ENST00000516772 96 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 SUB1P3-201ENST00000564581 315 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 CYP4A27P-201ENST00000567218 190 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 SNORA77B-201ENST00000578179 125 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 Z98751.3-201ENST00000604447 521 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CLN6Q9NWW5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 MIR8063-201ENST00000621930 81 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 AC068205.3-201ENST00000636385 468 ntBASIC1.23□□□□□ -2.21
CLN6Q9NWW5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AL159152.1-201ENST00000635019 2587 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 RNU6-271P-201ENST00000363858 105 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 Y_RNA.201-201ENST00000364052 96 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 RNA5SP190-201ENST00000365222 118 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 SNORD26-201ENST00000384147 75 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 RNU6-378P-201ENST00000384324 107 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 MIR520A-201ENST00000384862 85 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 RPL9P9-202ENST00000466501 579 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 RNA5SP445-201ENST00000515889 115 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC021231.3-201ENST00000558497 370 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC015720.1-201ENST00000565251 277 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AGGF1P4-201ENST00000568249 801 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC090517.1-201ENST00000569307 266 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC013412.1-201ENST00000610687 192 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC136475.10-201ENST00000620253 385 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 MIR7843-201ENST00000622274 79 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC009161.2-201ENST00000624626 138 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 AC091812.1-201ENST00000432235 1948 ntBASIC1.22□□□□□ -2.21
CLN6Q9NWW5 RNU6-181P-201ENST00000363225 107 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 RNU6-606P-201ENST00000384721 111 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 MIR208B-201ENST00000401172 77 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 RNU2-9P-201ENST00000410194 145 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.21□□□□□ -2.22
CLN6Q9NWW5 HSPE1P9-201ENST00000440046 311 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 JTBP1-201ENST00000441314 247 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.21□□□□□ -2.22
CLN6Q9NWW5 RPL26P26-201ENST00000480251 434 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AC091874.1-201ENST00000511402 339 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 RNU6-445P-201ENST00000516949 107 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 RNU6-902P-201ENST00000517212 91 ntBASIC1.21□□□□□ -2.22
CLN6Q9NWW5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.21□□□□□ -2.22
CLN6Q9NWW5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms