Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC109479.2-201ENST00000517842 174 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AC084364.2-201ENST00000546924 395 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 HSPE1P4-201ENST00000550617 308 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AC008269.2-201ENST00000561915 1105 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 MIR5094-201ENST00000578766 85 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AC091805.2-201ENST00000603848 235 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 AC008945.2-201ENST00000606056 604 ntBASIC1.25□□□□□ -2.21
TREX1Q9NSU2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
TREX1Q9NSU2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TREX1Q9NSU2 Y_RNA.332-201ENST00000365271 113 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 RNU6-393P-201ENST00000384475 107 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 RNU6-939P-201ENST00000384634 107 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 HMGN1P14-201ENST00000412459 517 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC123900.1-201ENST00000420390 96 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AL031274.1-201ENST00000450334 232 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC099513.1-201ENST00000490423 301 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC090821.2-201ENST00000523552 176 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 SUB1P4-201ENST00000566062 339 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC008752.3-201ENST00000588113 712 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 BNIP3P16-201ENST00000589779 534 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AP001506.1-201ENST00000615444 211 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC079248.2-201ENST00000623779 326 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AL603839.4-201ENST00000624658 1005 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC007494.3-201ENST00000624660 743 ntBASIC1.24□□□□□ -2.21
TREX1Q9NSU2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TREX1Q9NSU2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 RNU6-1097P-201ENST00000363586 107 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 RNU6-553P-201ENST00000364047 96 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 SNORD70.1-201ENST00000391007 85 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 FGF7P8-201ENST00000402994 292 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 RNU4-46P-201ENST00000410818 138 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 RPL21P111-201ENST00000418453 477 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC139712.2-201ENST00000424302 339 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC009961.2-201ENST00000435771 251 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 PRPS1P1-201ENST00000445305 876 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC245517.4-201ENST00000448601 281 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 HMGN1P13-201ENST00000505795 138 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC097473.1-201ENST00000508142 408 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC087441.2-201ENST00000529141 262 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 MIR3923-201ENST00000579521 83 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 VN1R80P-201ENST00000597126 338 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 AL359821.1-201ENST00000605519 182 ntBASIC1.23□□□□□ -2.21
TREX1Q9NSU2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.23□□□□□ -2.21
TREX1Q9NSU2 RNU6-414P-201ENST00000363705 104 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 RNU6-108P-201ENST00000365558 107 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 RNU6-456P-201ENST00000384493 107 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 BX295541.1-201ENST00000417774 250 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 BTF3P4-201ENST00000418852 495 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 MTND1P18-201ENST00000448191 573 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 RNU1-131P-201ENST00000458943 161 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.22□□□□□ -2.21
TREX1Q9NSU2 AK3P2-201ENST00000507976 429 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 LRRC34P2-201ENST00000514850 553 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 RNA5SP445-201ENST00000515889 115 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.22□□□□□ -2.21
TREX1Q9NSU2 HMGB1P33-201ENST00000563485 527 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.22□□□□□ -2.21
TREX1Q9NSU2 AC023043.2-201ENST00000589678 1026 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 AC012507.3-201ENST00000603556 477 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 AC022418.1-201ENST00000624118 445 ntBASIC1.22□□□□□ -2.21
TREX1Q9NSU2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
TREX1Q9NSU2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TREX1Q9NSU2 AP000560.1-201ENST00000624150 1937 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 U3.4-201ENST00000363352 213 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 RNU6-112P-201ENST00000363599 104 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 RNU6-827P-201ENST00000365553 106 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 RNU6-434P-201ENST00000384376 107 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.21□□□□□ -2.22
TREX1Q9NSU2 CYCSP46-201ENST00000423569 204 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
TREX1Q9NSU2 MTCO1P44-201ENST00000441935 243 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.21□□□□□ -2.22
TREX1Q9NSU2 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.21□□□□□ -2.22
TREX1Q9NSU2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.21□□□□□ -2.22
TREX1Q9NSU2 SNORD27.1-201ENST00000516319 72 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 SNORA18.6-201ENST00000516792 115 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 RNU6-902P-201ENST00000517212 91 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 AC103996.1-201ENST00000555468 102 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.21□□□□□ -2.22
TREX1Q9NSU2 AC109446.2-201ENST00000567872 497 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 AC073413.2-201ENST00000604332 360 ntBASIC1.21□□□□□ -2.22
TREX1Q9NSU2 AL355802.3-201ENST00000607571 545 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms