Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PRDM9Q9NQV7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRDM9Q9NQV7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRDM9Q9NQV7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.4□□□□□ -1.7
PRDM9Q9NQV7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 Y_RNA.111-201ENST00000363248 100 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 RNU6-1138P-201ENST00000365359 106 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 SNORA51.10-201ENST00000384418 136 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 AL133475.1-201ENST00000404414 305 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 RPS16P5-201ENST00000406501 404 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 AC245291.1-201ENST00000419501 328 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 YME1L1P1-201ENST00000429435 297 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 VDAC1P3-201ENST00000434069 851 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP236-201ENST00000516169 116 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 RNU6-158P-201ENST00000517104 100 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 HSPE1P18-201ENST00000517602 280 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 AP006289.1-201ENST00000538089 277 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 HMGN2P15-201ENST00000585707 270 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 AL442128.1-201ENST00000615151 90 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 AC140113.4-201ENST00000622087 222 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 BMS1P21-201ENST00000634565 365 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 MIR1245B-201ENST00000636115 69 ntBASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PRDM9Q9NQV7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP173-201ENST00000364857 136 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 SNORA71.2-201ENST00000364941 134 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 Z74021.1-201ENST00000423610 407 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 SNORD11-201ENST00000459124 84 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 AC010531.2-201ENST00000465012 153 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 RPL39P34-201ENST00000477141 156 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 RN7SKP12-201ENST00000516275 143 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 Vault.1-201ENST00000516474 102 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 RPL23AP97-201ENST00000568955 471 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 AC025521.1-201ENST00000621624 286 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 AC006435.5-201ENST00000624486 112 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 USP8P1-201ENST00000494673 3183 ntBASIC4.39□□□□□ -1.71
PRDM9Q9NQV7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP28-201ENST00000363841 119 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 RNU4-13P-201ENST00000364019 141 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 Y_RNA.220-201ENST00000364244 109 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 Y_RNA.549-201ENST00000384657 102 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 MIR192-201ENST00000384915 110 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 MIR300-201ENST00000401138 83 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 SCARNA10-201ENST00000459255 330 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 RN7SL585P-201ENST00000470538 280 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 AC023141.12-201ENST00000512399 199 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP20-201ENST00000515976 84 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 AC007751.1-201ENST00000529260 376 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 U3.53-201ENST00000628922 216 ntBASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.38□□□□□ -1.71
PRDM9Q9NQV7 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 Y_RNA.203-201ENST00000364106 102 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 MIR488-201ENST00000365739 83 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 RNA5SP397-201ENST00000391323 118 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 SNORD65B-201ENST00000459126 73 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 RNU6-221P-201ENST00000459541 99 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 AC015720.1-201ENST00000565251 277 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 RPL23AP91-201ENST00000569211 455 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 MIR6820-201ENST00000611508 62 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 Y_RNA.818-201ENST00000618813 71 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 AC087190.4-201ENST00000574616 8334 ntBASIC4.37□□□□□ -1.71
PRDM9Q9NQV7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms