Protein–RNA interactions for Protein: Q9NQ50

MRPL40, 39S ribosomal protein L40, mitochondrial, humanhuman

Known RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40Q9NQ50 AC105758.1-201ENST00000506038 399 ntBASIC0.27□□□□□ -2.37
MRPL40Q9NQ50 RNU6-150P-201ENST00000516237 95 ntBASIC0.27□□□□□ -2.37
MRPL40Q9NQ50 RN7SKP12-201ENST00000516275 143 ntBASIC0.27□□□□□ -2.37
MRPL40Q9NQ50 MTCO3P15-201ENST00000526563 574 ntBASIC0.27□□□□□ -2.37
MRPL40Q9NQ50 AL355816.2-201ENST00000610049 647 ntBASIC0.27□□□□□ -2.37
MRPL40Q9NQ50 AC023158.2-201ENST00000614876 543 ntBASIC0.27□□□□□ -2.37
MRPL40Q9NQ50 RNU6-853P-201ENST00000364306 107 ntBASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 RNU4-67P-201ENST00000364569 141 ntBASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 RNU6-534P-201ENST00000364877 106 ntBASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 AC091435.1-201ENST00000505442 584 ntBASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.26□□□□□ -2.37
MRPL40Q9NQ50 Y_RNA.178-201ENST00000363832 102 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 RNU6-438P-201ENST00000365561 103 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 RPS3AP37-201ENST00000419176 745 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AC092423.1-201ENST00000430165 186 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AL035398.1-201ENST00000430869 322 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 ZFAND6P1-201ENST00000434138 605 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 FABP5P4-201ENST00000437203 171 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AC115990.1-201ENST00000526957 301 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AL513534.2-201ENST00000603836 250 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AL138889.2-201ENST00000603883 242 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AC012557.2-201ENST00000605919 418 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AC022893.3-201ENST00000607665 437 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AL353149.1-201ENST00000610667 244 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 MIR8084-201ENST00000614105 89 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 AL138726.1-201ENST00000614873 333 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 SNORD3E-202ENST00000627253 216 ntBASIC0.25□□□□□ -2.37
MRPL40Q9NQ50 Y_RNA.363-201ENST00000365529 113 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 SNORA32.2-201ENST00000384049 122 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 FCF1P10-201ENST00000407590 479 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 MIR1305-201ENST00000408300 86 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 ZNF886P-201ENST00000450781 723 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 AL162395.1-201ENST00000457882 422 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 HMGN1P10-201ENST00000474557 553 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 SUMO2P5-201ENST00000506790 245 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 SNORA43.2-201ENST00000516652 128 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 DEFB108A-201ENST00000530110 222 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 AL022154.1-201ENST00000604698 785 ntBASIC0.24□□□□□ -2.37
MRPL40Q9NQ50 AC090625.1-201ENST00000357130 210 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 Y_RNA.280-201ENST00000364765 112 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 SNORA4.2-201ENST00000365313 147 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 Y_RNA.433-201ENST00000384089 102 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 RNU6-45P-201ENST00000384471 107 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 RNU6-1237P-201ENST00000384777 107 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 RNU6-278P-201ENST00000390945 109 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 MTCO2P1-201ENST00000424648 477 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AC000111.3-201ENST00000433478 193 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AL158053.1-201ENST00000441503 453 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AL122001.1-201ENST00000457027 370 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 snoU109.2-201ENST00000459316 135 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AC010587.2-201ENST00000511727 448 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 MTCO3P28-201ENST00000513351 515 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 RNU6-677P-201ENST00000516914 101 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AC068620.3-201ENST00000602749 560 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AC174048.1-201ENST00000603389 144 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 AL445435.1-201ENST00000604232 665 ntBASIC0.23□□□□□ -2.37
MRPL40Q9NQ50 RNU4-15P-201ENST00000362613 141 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 SNORA72.2-201ENST00000365028 127 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 RNU6-950P-201ENST00000384651 107 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 AL606662.1-201ENST00000445763 553 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 RNU7-34P-201ENST00000459394 64 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 AC022447.4-201ENST00000504053 364 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 MIR5708-201ENST00000579723 85 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 AL031281.1-201ENST00000604049 488 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
MRPL40Q9NQ50 Y_RNA.412-201ENST00000384001 104 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 RNU6-163P-201ENST00000384396 106 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 RNU1-119P-201ENST00000391122 165 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 MRPS36P1-201ENST00000421291 307 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 AC011233.1-201ENST00000422812 283 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 RPL23AP95-201ENST00000426806 265 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 AC104982.1-201ENST00000478775 574 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 SUMO2P16-201ENST00000519475 264 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 AC099654.8-201ENST00000637757 681 ntBASIC0.21□□□□□ -2.38
MRPL40Q9NQ50 SNORD56.1-201ENST00000362913 68 ntBASIC0.2□□□□□ -2.38
MRPL40Q9NQ50 SNORA12-201ENST00000391162 147 ntBASIC0.2□□□□□ -2.38
MRPL40Q9NQ50 AL359704.1-201ENST00000411586 781 ntBASIC0.2□□□□□ -2.38
MRPL40Q9NQ50 TIMM9P2-201ENST00000419324 266 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms