Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VTA1Q9NP79 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.34□□□□□ -1.87
VTA1Q9NP79 AC005592.1-201ENST00000566527 1640 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 RNU6-17P-201ENST00000384245 107 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 RNU1-57P-201ENST00000384491 166 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 RNU6-18P-201ENST00000384527 107 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 RNU6-738P-201ENST00000384531 106 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 RNU6-308P-201ENST00000390957 107 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 MICF-203ENST00000432679 129 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.34□□□□□ -1.87
VTA1Q9NP79 RN7SL20P-201ENST00000488827 297 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 RNU1-143P-201ENST00000516296 146 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 MRPS36P4-201ENST00000534436 298 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.34□□□□□ -1.87
VTA1Q9NP79 VN1R91P-201ENST00000594377 169 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 U1.23-201ENST00000610293 146 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 AC040896.1-201ENST00000613819 479 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 RNU1-68P-201ENST00000615382 146 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 U1.39-201ENST00000621562 146 ntBASIC3.34□□□□□ -1.87
VTA1Q9NP79 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
VTA1Q9NP79 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.34□□□□□ -1.88
VTA1Q9NP79 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VTA1Q9NP79 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VTA1Q9NP79 RNU6-486P-201ENST00000363116 107 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 Y_RNA.132-201ENST00000363421 102 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 RNU5F-3P-201ENST00000363767 117 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 Y_RNA.216-201ENST00000364205 93 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 SNORA9.2-201ENST00000365361 133 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 Y_RNA.405-201ENST00000383979 100 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 Y_RNA.451-201ENST00000384200 100 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 Y_RNA.524-201ENST00000384564 100 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 Y_RNA.561-201ENST00000384694 100 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 Y_RNA.605-201ENST00000410577 105 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 RPL32P35-201ENST00000415214 394 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 AC012306.1-201ENST00000423267 114 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 AC092423.1-201ENST00000430165 186 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.33□□□□□ -1.88
VTA1Q9NP79 AC009296.1-201ENST00000443146 155 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 GSTA11P-201ENST00000452866 669 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 AC091179.1-201ENST00000461606 579 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 AC087477.1-201ENST00000465747 340 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 SNRPGP7-201ENST00000469016 106 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 AC091874.1-201ENST00000511402 339 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 RNU6-120P-201ENST00000516077 103 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 RNU6-327P-201ENST00000516270 127 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 AC027176.1-201ENST00000560204 514 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 MIR4765-201ENST00000585007 77 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 AC007318.2-201ENST00000620999 243 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.33□□□□□ -1.88
VTA1Q9NP79 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.33□□□□□ -1.88
VTA1Q9NP79 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VTA1Q9NP79 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VTA1Q9NP79 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VTA1Q9NP79 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VTA1Q9NP79 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 MIR148B-201ENST00000362252 99 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 RNU6-655P-201ENST00000362858 107 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 RNU6-1210P-201ENST00000363775 107 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 RNU4-42P-201ENST00000364738 142 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 MIR186-201ENST00000384988 86 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 AL590135.1-201ENST00000422215 156 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 MRPS18CP6-201ENST00000423587 223 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 AC019205.3-201ENST00000424573 156 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 AC016700.2-201ENST00000446011 156 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 OR2AQ1P-201ENST00000451972 200 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 RPS29P12-201ENST00000460178 152 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 RN7SL283P-201ENST00000489055 303 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 HMGB1P35-201ENST00000503360 598 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 RAC1P5-201ENST00000512182 576 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 RN7SKP132-201ENST00000516001 208 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 RNU4-77P-201ENST00000516692 156 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 CYP4A27P-201ENST00000567218 190 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 AC007485.1-201ENST00000616755 206 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 MIR7157-201ENST00000635801 60 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 MIR4272-201ENST00000635924 64 ntBASIC3.32□□□□□ -1.88
VTA1Q9NP79 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
VTA1Q9NP79 AC026241.1-201ENST00000517873 2142 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.31□□□□□ -1.88
VTA1Q9NP79 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VTA1Q9NP79 RNU6-212P-201ENST00000362642 104 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 SNORD115-8-201ENST00000363856 82 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 U3.13-201ENST00000364804 214 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 SNORD115-38-201ENST00000365037 82 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 SNORA18.3-201ENST00000384122 132 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 CBX3P9-201ENST00000402326 552 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 AC021146.2-201ENST00000504736 556 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 AC105758.1-201ENST00000506038 399 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 RNA5SP385-201ENST00000515947 110 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 RNA5SP54-201ENST00000516951 92 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 AC104027.1-201ENST00000521887 300 ntBASIC3.31□□□□□ -1.88
VTA1Q9NP79 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.31□□□□□ -1.88
VTA1Q9NP79 MIR4319-201ENST00000577285 85 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms