Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RPS29P12-201ENST00000460178 152 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 RPL30P10-201ENST00000488148 337 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 SNORA25.10-201ENST00000515926 124 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 RNU5F-8P-201ENST00000515941 111 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 RNU5B-3P-201ENST00000516601 115 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 MRPS36P4-201ENST00000534436 298 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 MIR4680-201ENST00000580906 66 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 SNORD58B-201ENST00000607313 66 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 AL359198.2-201ENST00000611836 194 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 AC138305.3-201ENST00000624988 240 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 Y_RNA.145-201ENST00000363527 102 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 Y_RNA.364-201ENST00000365532 101 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 AC117470.1-201ENST00000381974 330 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 RNU6-748P-201ENST00000384648 107 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 RNU6-19P-201ENST00000384718 107 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 MIR544A-201ENST00000384855 91 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 MIR767-201ENST00000390228 109 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 Y_RNA.645-201ENST00000391229 102 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 RNU6-1245P-201ENST00000411130 106 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 AL358075.3-201ENST00000426289 226 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 AL135938.1-201ENST00000443141 297 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.91□□□□□ -1.94
USP29Q9HBJ7 AL513124.1-201ENST00000450410 614 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 RPL30P1-201ENST00000488676 339 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 RPL23AP78-201ENST00000599928 470 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 AC087588.2-201ENST00000617667 426 ntBASIC2.91□□□□□ -1.94
USP29Q9HBJ7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.91□□□□□ -1.94
USP29Q9HBJ7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.91□□□□□ -1.94
USP29Q9HBJ7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.91□□□□□ -1.94
USP29Q9HBJ7 RNU6-874P-201ENST00000362390 105 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 RNU6-1141P-201ENST00000364520 107 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 RNU2-23P-201ENST00000410545 195 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 RNA5SP494-201ENST00000410653 129 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 RNA5SP184-201ENST00000411071 108 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC009414.1-201ENST00000427200 443 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC003982.1-202ENST00000469928 248 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC103975.1-201ENST00000482506 483 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 RAC1P5-201ENST00000512182 576 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AC004584.2-201ENST00000570407 410 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 AL450472.1-202ENST00000637286 180 ntBASIC2.9□□□□□ -1.95
USP29Q9HBJ7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.9□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
USP29Q9HBJ7 RNU6-1286P-201ENST00000383871 107 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.485-201ENST00000384395 102 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 RNU6-1222P-201ENST00000384615 107 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 RNU6-1140P-201ENST00000410517 106 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AL358453.1-201ENST00000422522 250 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.89□□□□□ -1.95
USP29Q9HBJ7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 RN7SKP210-201ENST00000459176 261 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 RPS29P26-201ENST00000477483 171 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AC023442.1-201ENST00000531247 422 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AL590705.4-201ENST00000532209 134 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AC010928.2-201ENST00000588017 287 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AC104695.3-201ENST00000604052 296 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AL162730.1-201ENST00000605734 292 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 RNU6-91P-201ENST00000607774 107 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 MIR1244-1-201ENST00000612829 85 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AL159153.1-201ENST00000619688 317 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 AL606534.2-204ENST00000635008 178 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 MIR1244-3-201ENST00000635744 85 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 MIR4272-201ENST00000635924 64 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 MIR1244-2-201ENST00000636449 85 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 MIR1244-4-202ENST00000636813 85 ntBASIC2.89□□□□□ -1.95
USP29Q9HBJ7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.89□□□□□ -1.95
USP29Q9HBJ7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USP29Q9HBJ7 RNU4-42P-201ENST00000364738 142 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 Y_RNA.314-201ENST00000365114 102 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 RNU6-301P-201ENST00000384277 107 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 SNORA12.2-201ENST00000391040 156 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 RNU6-985P-201ENST00000410182 104 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 RN7SKP61-201ENST00000410642 295 ntBASIC2.88□□□□□ -1.95
USP29Q9HBJ7 MTCYBP10-201ENST00000424905 650 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms