Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
ELL3Q9HB65 ZNF885P-201ENST00000420174 1098 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 AC078809.1-201ENST00000427601 140 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 IFNA20P-201ENST00000436840 528 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 CYP2C59P-201ENST00000457790 269 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 TRBVA-201ENST00000498804 316 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 RNU6-864P-201ENST00000516256 108 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 RNU6-273P-201ENST00000516937 96 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 RPS3AP23-202ENST00000574601 686 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 AL034555.1-201ENST00000604816 211 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 MIR3976-201ENST00000606807 139 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 AC122108.2-201ENST00000611946 526 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 U4atac.1-201ENST00000618345 95 ntBASIC1.9□□□□□ -2.11
ELL3Q9HB65 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.9□□□□□ -2.11
ELL3Q9HB65 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.89□□□□□ -2.11
ELL3Q9HB65 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ELL3Q9HB65 Y_RNA.248-201ENST00000364501 109 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 RNA5SP240-201ENST00000365355 128 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 SNORD116-11-201ENST00000383882 92 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 MIR561-201ENST00000385216 97 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.89□□□□□ -2.11
ELL3Q9HB65 RNU4-53P-201ENST00000410828 140 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 RNU2-32P-201ENST00000411193 191 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.89□□□□□ -2.11
ELL3Q9HB65 UBE2V1P4-201ENST00000425374 344 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC018634.1-201ENST00000437554 401 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC009238.1-201ENST00000442165 424 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC009237.6-201ENST00000446969 424 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC104435.1-201ENST00000483483 166 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC145146.1-201ENST00000496370 254 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.89□□□□□ -2.11
ELL3Q9HB65 RNU4-49P-201ENST00000516080 140 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 RNU6-358P-201ENST00000516564 75 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 RNU6-667P-201ENST00000517186 102 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.89□□□□□ -2.11
ELL3Q9HB65 AF235103.2-201ENST00000525753 346 ntBASIC1.89□□□□□ -2.11
ELL3Q9HB65 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.89□□□□□ -2.11
ELL3Q9HB65 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ELL3Q9HB65 AL596028.1-201ENST00000326971 197 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ELL3Q9HB65 RNU6-227P-201ENST00000362865 103 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 Y_RNA.157-201ENST00000363638 102 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 SNORD32B-201ENST00000364460 84 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 SNORA16B-201ENST00000364674 135 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ELL3Q9HB65 RNU6-142P-201ENST00000384019 107 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 RNU6-378P-201ENST00000384324 107 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 SNORD23.1-201ENST00000408212 104 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 RNA5SP201-201ENST00000410316 124 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.88□□□□□ -2.11
ELL3Q9HB65 HMGN2P38-201ENST00000423806 265 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC124916.1-201ENST00000444020 547 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.88□□□□□ -2.11
ELL3Q9HB65 MTCO2P30-201ENST00000503662 364 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC022447.4-201ENST00000504053 364 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.88□□□□□ -2.11
ELL3Q9HB65 RNU7-193P-201ENST00000516723 65 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 RN7SKP256-201ENST00000517201 314 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC034114.1-201ENST00000520293 285 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 SNORD53-201ENST00000579969 78 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC018638.8-201ENST00000588755 281 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC023043.2-201ENST00000589678 1026 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 Z98751.3-201ENST00000604447 521 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AL133215.3-201ENST00000609801 448 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC008121.3-201ENST00000618726 433 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.88□□□□□ -2.11
ELL3Q9HB65 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.88□□□□□ -2.11
ELL3Q9HB65 AC009541.1-201ENST00000438279 2662 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ELL3Q9HB65 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
ELL3Q9HB65 AP000560.1-201ENST00000624150 1937 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 Y_RNA.123-201ENST00000363338 102 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 SNORA46.1-201ENST00000391069 153 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 MIR1262-201ENST00000408276 93 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 RN7SKP158-201ENST00000410453 326 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 RNA5SP508-201ENST00000411327 119 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 EDDM3CP-201ENST00000415977 425 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 AL139415.2-201ENST00000431968 163 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 snoU13.6-201ENST00000458785 104 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.87□□□□□ -2.11
ELL3Q9HB65 AC021146.2-201ENST00000504736 556 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 AC096745.1-201ENST00000509945 370 ntBASIC1.87□□□□□ -2.11
ELL3Q9HB65 RNU1-40P-201ENST00000516816 164 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms