Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SNORD5.1-201ENST00000458800 75 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 Y_RNA.635-201ENST00000459041 101 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 RPS29P27-201ENST00000463711 170 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 AC090515.1-201ENST00000465295 476 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.53□□□□□ -2
UPF2Q9HAU5 SCARNA17.1-201ENST00000516211 143 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 SCARNA17.2-201ENST00000516334 143 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.53□□□□□ -2
UPF2Q9HAU5 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.53□□□□□ -2
UPF2Q9HAU5 AC018462.2-201ENST00000605375 395 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 SCARNA17.4-201ENST00000614296 143 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.53□□□□□ -2
UPF2Q9HAU5 MIR3199-2-201ENST00000636243 86 ntBASIC2.53□□□□□ -2
UPF2Q9HAU5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.53□□□□□ -2
UPF2Q9HAU5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.53□□□□□ -2
UPF2Q9HAU5 KPNA2P1-201ENST00000458289 1591 ntBASIC2.53□□□□□ -2.01
UPF2Q9HAU5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 MTND4P23-201ENST00000447723 1363 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 RNU6-105P-201ENST00000363909 104 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 RNU6-1317P-201ENST00000364582 104 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.259-201ENST00000364619 101 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 RNU1-91P-201ENST00000364746 163 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.482-201ENST00000384377 111 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 RNU6-601P-201ENST00000384540 107 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 MIR517A-201ENST00000385001 87 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 RNY4P36-201ENST00000391116 96 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.594-201ENST00000410373 140 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AL139396.1-201ENST00000421137 167 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 MTCO3P10-201ENST00000455912 772 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC128713.1-201ENST00000471495 306 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AP001025.1-201ENST00000486139 332 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC116655.1-201ENST00000508324 901 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC005741.1-201ENST00000511094 432 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 RNU6-1016P-201ENST00000516689 94 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 SCARNA11.3-201ENST00000517276 130 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC109329.2-201ENST00000519658 482 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AP004607.1-201ENST00000524456 203 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AL121821.2-201ENST00000556081 394 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 MIR3616-201ENST00000584070 92 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AP000654.2-201ENST00000605633 586 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.52□□□□□ -2.01
UPF2Q9HAU5 AC097372.5-201ENST00000623665 376 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 SCARNA4-202ENST00000625402 129 ntBASIC2.52□□□□□ -2.01
UPF2Q9HAU5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.11-201ENST00000362375 109 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.138-201ENST00000363462 102 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.315-201ENST00000365117 102 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 RNU5E-7P-201ENST00000365290 117 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 SNORA11.4-201ENST00000408823 129 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.646-201ENST00000410980 101 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 AL354751.2-201ENST00000415471 210 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 MTND4P28-201ENST00000426217 387 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 AL133396.1-201ENST00000432048 687 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 OSTCP8-201ENST00000445117 448 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 AC007677.1-201ENST00000445757 515 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 RPL7P42-201ENST00000481005 679 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 RNU5F-8P-201ENST00000515941 111 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
UPF2Q9HAU5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.51□□□□□ -2.01
UPF2Q9HAU5 MIR4658-201ENST00000584344 65 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 AC011494.1-201ENST00000596454 237 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 AC091152.3-201ENST00000604227 325 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.51□□□□□ -2.01
UPF2Q9HAU5 AC010889.1-201ENST00000566193 2666 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
UPF2Q9HAU5 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.132-201ENST00000363421 102 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 RNU6-1297P-201ENST00000384415 104 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 RNU6-310P-201ENST00000384655 107 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 RNU6-443P-201ENST00000384780 107 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.579-201ENST00000390939 94 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.5□□□□□ -2.01
UPF2Q9HAU5 AC004383.1-201ENST00000438135 289 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 AC107626.1-201ENST00000471084 183 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.5□□□□□ -2.01
UPF2Q9HAU5 RNU6-120P-201ENST00000516077 103 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 RNA5SP384-201ENST00000516615 116 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 Y_RNA.701-201ENST00000516812 110 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 SNORA31.23-201ENST00000517219 133 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.5□□□□□ -2.01
UPF2Q9HAU5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
UPF2Q9HAU5 AC044792.1-201ENST00000593294 196 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.5□□□□□ -2.01
UPF2Q9HAU5 AL356280.1-201ENST00000603614 379 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 MIR3976-201ENST00000606807 139 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 AC009229.3-201ENST00000608056 282 ntBASIC2.5□□□□□ -2.01
UPF2Q9HAU5 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms