Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC004584.2-201ENST00000570407 410 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 AC010900.2-201ENST00000604508 210 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 AL138825.1-201ENST00000618587 192 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 SDR42E1P4-201ENST00000620894 481 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 AL355596.1-201ENST00000565399 3996 ntBASIC2.92□□□□□ -1.94
EBF3Q9H4W6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
EBF3Q9H4W6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.91□□□□□ -1.94
EBF3Q9H4W6 AP000560.1-201ENST00000624150 1937 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
EBF3Q9H4W6 OR56A5-201ENST00000340110 738 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 RNU4-82P-201ENST00000362443 140 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 SNORA20.1-201ENST00000364790 130 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 SNORA40C-201ENST00000391285 128 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 RNU2-68P-201ENST00000410878 191 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 RNU2-14P-201ENST00000411053 191 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 AC139712.2-201ENST00000424302 339 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 AL627311.1-201ENST00000431514 115 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 SNRPEP9-201ENST00000436794 238 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 RPL39P38-201ENST00000467018 153 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 GZMAP1-201ENST00000503054 631 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.91□□□□□ -1.94
EBF3Q9H4W6 RNU7-4P-201ENST00000516961 62 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 AC025755.1-201ENST00000521306 278 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 AP003733.2-201ENST00000529409 171 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.91□□□□□ -1.94
EBF3Q9H4W6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.91□□□□□ -1.94
EBF3Q9H4W6 MIR5696-201ENST00000578474 85 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.91□□□□□ -1.94
EBF3Q9H4W6 MTND5P6-201ENST00000422338 1798 ntBASIC2.91□□□□□ -1.94
EBF3Q9H4W6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
EBF3Q9H4W6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.9□□□□□ -1.94
EBF3Q9H4W6 RNU6-37P-201ENST00000362692 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-11P-201ENST00000364234 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU1-112P-201ENST00000364401 164 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 SNORD14B-201ENST00000364533 90 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-25P-201ENST00000383873 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-1-201ENST00000383898 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-48P-201ENST00000384161 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-36P-201ENST00000384172 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-4P-201ENST00000384205 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-5P-201ENST00000384238 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-3P-201ENST00000384314 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-16P-201ENST00000384385 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-15P-201ENST00000384534 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-2-201ENST00000384627 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.539-201ENST00000384635 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-29P-201ENST00000384637 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-9-201ENST00000384776 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-33P-201ENST00000384793 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 MIR215-201ENST00000384858 110 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 MIR625-201ENST00000385047 85 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 AL591034.2-201ENST00000402839 359 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.623-201ENST00000411128 95 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.9□□□□□ -1.95
EBF3Q9H4W6 AL590135.1-201ENST00000422215 156 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RPEP5-201ENST00000441137 268 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.9□□□□□ -1.95
EBF3Q9H4W6 AL645944.1-201ENST00000603857 493 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 RNU6-6P-201ENST00000606623 107 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 AL359198.2-201ENST00000611836 194 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 AP001282.2-201ENST00000616149 309 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 AC130454.1-201ENST00000622948 401 ntBASIC2.9□□□□□ -1.95
EBF3Q9H4W6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.9□□□□□ -1.95
EBF3Q9H4W6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.9□□□□□ -1.95
EBF3Q9H4W6 MAPK10-322ENST00000641485 4530 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 RPL9P7-201ENST00000330965 580 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 SNORD50.1-201ENST00000362987 71 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 RNU6-595P-201ENST00000363944 107 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 RNU4-50P-201ENST00000364361 141 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 RNU6-217P-201ENST00000384164 104 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 Y_RNA.471-201ENST00000384312 102 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AL138827.1-201ENST00000402666 306 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 SNORD56-201ENST00000413522 71 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AL096701.2-201ENST00000416920 238 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 EIF4EP2-201ENST00000422816 654 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC092423.1-201ENST00000430165 186 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AL513043.1-201ENST00000439124 535 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.89□□□□□ -1.95
EBF3Q9H4W6 RPL9P9-202ENST00000466501 579 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC139453.3-201ENST00000493276 369 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 HMGB1P35-201ENST00000503360 598 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF3Q9H4W6 SNORA40.15-201ENST00000516884 107 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 SNORA31.19-201ENST00000517079 126 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 RN7SKP40-201ENST00000517211 242 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC034114.1-201ENST00000520293 285 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 CASP1P1-201ENST00000526345 212 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC073410.2-201ENST00000603240 332 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC009314.1-201ENST00000603871 304 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AP000787.2-201ENST00000604432 568 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC013412.1-201ENST00000610687 192 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 AC002076.2-201ENST00000617362 122 ntBASIC2.89□□□□□ -1.95
EBF3Q9H4W6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms