Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL358453.1-201ENST00000422522 250 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2□□□□□ -2.09
RNF41Q9H4P4 SNAP23P1-201ENST00000433229 246 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2□□□□□ -2.09
RNF41Q9H4P4 RPL39P29-201ENST00000447779 157 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 AC012308.1-201ENST00000451232 178 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 AL353752.1-201ENST00000454946 260 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2□□□□□ -2.09
RNF41Q9H4P4 HMGN2P26-201ENST00000463169 339 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2□□□□□ -2.09
RNF41Q9H4P4 AC083904.1-201ENST00000487828 231 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 RPL30P1-201ENST00000488676 339 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2□□□□□ -2.09
RNF41Q9H4P4 Y_RNA.665-201ENST00000516177 98 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 MTND1P35-201ENST00000526739 508 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2□□□□□ -2.09
RNF41Q9H4P4 AC080078.2-201ENST00000603766 501 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 AC064836.2-201ENST00000609491 462 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 MIR8081-201ENST00000611533 95 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 AL449363.1-201ENST00000617815 186 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 MIR5739-201ENST00000619803 80 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2□□□□□ -2.09
RNF41Q9H4P4 MIR3688-2-201ENST00000636963 87 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2□□□□□ -2.09
RNF41Q9H4P4 AC073869.6-201ENST00000640656 341 ntBASIC2□□□□□ -2.09
RNF41Q9H4P4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2□□□□□ -2.09
RNF41Q9H4P4 Y_RNA.89-201ENST00000363031 102 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 SNORD48-201ENST00000364953 64 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 RNU6-1222P-201ENST00000384615 107 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 RNU6-332P-201ENST00000391193 108 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 RNU6-192P-201ENST00000391253 100 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 EIF4E2P1-201ENST00000393781 255 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 CBX3P9-201ENST00000402326 552 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 SNRPEP10-201ENST00000420249 274 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 MRPS10P2-201ENST00000431226 381 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 MTCO2P3-201ENST00000442543 421 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AL031274.1-201ENST00000450334 232 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC018868.1-201ENST00000491307 315 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 CYCSP26-201ENST00000534107 320 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC093249.1-201ENST00000567049 203 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 AC007792.1-201ENST00000623023 402 ntBASIC1.99□□□□□ -2.09
RNF41Q9H4P4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RNF41Q9H4P4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 RNU6-655P-201ENST00000362858 107 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 RNU6-254P-201ENST00000363377 107 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 RNU6-1210P-201ENST00000363775 107 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 RNU6-534P-201ENST00000364877 106 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 RNU4-12P-201ENST00000365233 139 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 MIR764-201ENST00000390811 85 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 MTND1P4-201ENST00000435196 415 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 UBE2V1P8-201ENST00000437166 265 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AL161788.1-201ENST00000441805 169 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 GPM6BP3-201ENST00000442797 145 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AC087854.1-201ENST00000519706 414 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 IMMP1LP2-201ENST00000552954 492 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AC091135.1-201ENST00000585943 307 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 CTHRC1P1-201ENST00000605383 469 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 AC098657.3-201ENST00000620434 263 ntBASIC1.98□□□□□ -2.09
RNF41Q9H4P4 RNU6-1329P-201ENST00000365664 107 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 RNU6-43P-201ENST00000384302 107 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 Y_RNA.505-201ENST00000384489 102 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RNF41Q9H4P4 SNORD115-47-201ENST00000391226 86 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 AL591034.2-201ENST00000402839 359 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 SNORD23.1-201ENST00000408212 104 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 RNU2-48P-201ENST00000410694 191 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.97□□□□□ -2.09
RNF41Q9H4P4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF41Q9H4P4 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 RNU7-66P-201ENST00000459469 62 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 AC068781.1-201ENST00000488231 618 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF41Q9H4P4 AC092436.3-201ENST00000511788 257 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 RNU5F-2P-201ENST00000516066 82 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 RNU7-193P-201ENST00000516723 65 ntBASIC1.97□□□□□ -2.09
RNF41Q9H4P4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF41Q9H4P4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF41Q9H4P4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms