Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC103996.1-201ENST00000555468 102 ntBASIC3.47□□□□□ -1.85
VPS11Q9H270 LINC00933-203ENST00000559812 219 ntBASIC3.47□□□□□ -1.85
VPS11Q9H270 MIR4308-201ENST00000580634 81 ntBASIC3.47□□□□□ -1.85
VPS11Q9H270 AC024220.1-201ENST00000603675 484 ntBASIC3.47□□□□□ -1.85
VPS11Q9H270 AC108706.1-201ENST00000611053 297 ntBASIC3.47□□□□□ -1.85
VPS11Q9H270 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VPS11Q9H270 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.47□□□□□ -1.85
VPS11Q9H270 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS11Q9H270 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
VPS11Q9H270 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VPS11Q9H270 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.47□□□□□ -1.85
VPS11Q9H270 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
VPS11Q9H270 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.46□□□□□ -1.85
VPS11Q9H270 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
VPS11Q9H270 SNORD9-201ENST00000362566 104 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 SNORD14B-201ENST00000364533 90 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 RNA5SP51-201ENST00000364750 119 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 RNU6-326P-201ENST00000365480 107 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 SNORD78.2-201ENST00000391076 69 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 AC023141.4-201ENST00000412031 328 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS11Q9H270 GOT2P5-201ENST00000433995 546 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 HMGN2P10-201ENST00000448085 265 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 RN7SKP210-201ENST00000459176 261 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 U8.21-201ENST00000459536 136 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 AP001324.2-201ENST00000461163 319 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 ANXA2P1-201ENST00000505539 926 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 RNU6-62P-201ENST00000516526 102 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 AC091144.1-201ENST00000519573 138 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 AC068657.1-201ENST00000520807 306 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS11Q9H270 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.46□□□□□ -1.86
VPS11Q9H270 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS11Q9H270 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS11Q9H270 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.46□□□□□ -1.86
VPS11Q9H270 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS11Q9H270 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.46□□□□□ -1.86
VPS11Q9H270 RPL23AP78-201ENST00000599928 470 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
VPS11Q9H270 RBBP8P1-201ENST00000449447 1844 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VPS11Q9H270 AC017071.1-201ENST00000564407 2204 ntBASIC3.46□□□□□ -1.86
VPS11Q9H270 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS11Q9H270 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
VPS11Q9H270 AC093010.3-201ENST00000570269 15214 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 RNU6-222P-201ENST00000362438 107 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.82-201ENST00000363000 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.92-201ENST00000363043 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.235-201ENST00000364412 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.306-201ENST00000365015 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.312-201ENST00000365089 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.322-201ENST00000365151 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.418-201ENST00000384029 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.441-201ENST00000384123 112 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AL033519.2-201ENST00000403958 392 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 RPL23AP36-201ENST00000413895 458 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.45□□□□□ -1.86
VPS11Q9H270 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS11Q9H270 AL591043.1-201ENST00000432461 424 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Z82188.1-201ENST00000436709 154 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AC005002.2-201ENST00000438228 269 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.650-201ENST00000459002 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 RPS26P21-201ENST00000475397 348 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 RPL23AP45-201ENST00000476406 468 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AC140059.1-201ENST00000489238 361 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS11Q9H270 RNU6-612P-201ENST00000516909 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 RNU2-31P-201ENST00000516954 155 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.777-201ENST00000516982 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.45□□□□□ -1.86
VPS11Q9H270 AC027288.2-201ENST00000553028 243 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AC021739.1-201ENST00000559631 174 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AC025281.1-201ENST00000567026 265 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS11Q9H270 AL451007.1-201ENST00000595491 289 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.771-201ENST00000598668 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AL133393.1-201ENST00000603277 287 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.45□□□□□ -1.86
VPS11Q9H270 MIR6134-201ENST00000617606 109 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 Y_RNA.789-201ENST00000622480 102 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 MIR3199-2-201ENST00000636243 86 ntBASIC3.45□□□□□ -1.86
VPS11Q9H270 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.45□□□□□ -1.86
VPS11Q9H270 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VPS11Q9H270 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
VPS11Q9H270 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
VPS11Q9H270 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS11Q9H270 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VPS11Q9H270 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 Y_RNA.435-201ENST00000384095 112 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 RNU6-318P-201ENST00000384283 103 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 MIR34A-201ENST00000385130 110 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 MIR767-201ENST00000390228 109 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VPS11Q9H270 Y_RNA.590-201ENST00000410140 107 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 RNU4-30P-201ENST00000410245 143 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 RNU2-61P-201ENST00000411069 191 ntBASIC3.44□□□□□ -1.86
VPS11Q9H270 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms