Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 AC107304.1-201ENST00000604229 296 ntBASIC0.82□□□□□ -2.28
MED28Q9H204 AL365434.2-201ENST00000607979 234 ntBASIC0.82□□□□□ -2.28
MED28Q9H204 AC009159.2-201ENST00000617603 606 ntBASIC0.82□□□□□ -2.28
MED28Q9H204 AP000720.1-201ENST00000625091 483 ntBASIC0.82□□□□□ -2.28
MED28Q9H204 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
MED28Q9H204 RNU1-76P-201ENST00000362903 159 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 RNU6-1303P-201ENST00000364841 107 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 RNU6-715P-201ENST00000365204 103 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 SNORA20.2-201ENST00000383922 131 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 U8.10-201ENST00000384260 133 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 RNU6-378P-201ENST00000384324 107 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 MIR513B-201ENST00000385136 84 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 RNU6-550P-201ENST00000391057 101 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 RPS29P13-201ENST00000402041 169 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 AL133396.1-201ENST00000432048 687 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 GTF2IP13-201ENST00000438487 386 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 PGBD4P5-201ENST00000445958 426 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.81□□□□□ -2.28
MED28Q9H204 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.81□□□□□ -2.28
MED28Q9H204 AL163195.1-201ENST00000496941 348 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 RNU6-1041P-201ENST00000516254 102 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.81□□□□□ -2.28
MED28Q9H204 AC022878.1-201ENST00000530684 149 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 DNAJC19P9-201ENST00000555084 351 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.81□□□□□ -2.28
MED28Q9H204 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.81□□□□□ -2.28
MED28Q9H204 AP005136.1-201ENST00000579765 429 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 AC005771.1-201ENST00000585581 349 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 MTCO2P2-201ENST00000591258 225 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.81□□□□□ -2.28
MED28Q9H204 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 AC112191.3-201ENST00000604371 277 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 AL356157.2-201ENST00000605122 111 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 CTHRC1P1-201ENST00000605383 469 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 AC008945.2-201ENST00000606056 604 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 AC099654.5-201ENST00000636479 350 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 MTND5P17-201ENST00000418405 1603 ntBASIC0.81□□□□□ -2.28
MED28Q9H204 AC092268.1-201ENST00000342691 405 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
MED28Q9H204 RNU5E-5P-201ENST00000365379 116 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 AC098592.1-201ENST00000419352 333 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.8□□□□□ -2.28
MED28Q9H204 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.8□□□□□ -2.28
MED28Q9H204 RPL23AP95-201ENST00000426806 265 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 SNAP23P1-201ENST00000433229 246 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.8□□□□□ -2.28
MED28Q9H204 AC069257.2-201ENST00000441819 155 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 AC073910.1-201ENST00000445047 438 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 AC132479.1-201ENST00000449160 144 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 USP9YP12-201ENST00000450481 570 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 snoU13.23-201ENST00000458863 104 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 RN7SKP210-201ENST00000459176 261 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC0.8□□□□□ -2.28
MED28Q9H204 RPS23P4-201ENST00000487908 423 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.8□□□□□ -2.28
MED28Q9H204 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.8□□□□□ -2.28
MED28Q9H204 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.8□□□□□ -2.28
MED28Q9H204 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.8□□□□□ -2.28
MED28Q9H204 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.8□□□□□ -2.28
MED28Q9H204 RPL17P51-201ENST00000605218 238 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 AC091304.9-201ENST00000612091 226 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 AC011155.2-201ENST00000623202 216 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 AL450472.1-202ENST00000637286 180 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 AC007671.2-201ENST00000637344 619 ntBASIC0.8□□□□□ -2.28
MED28Q9H204 RNU6-500P-201ENST00000362349 107 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 RNU6-552P-201ENST00000362869 119 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 RNU1-22P-201ENST00000363334 158 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 RNU6-1026P-201ENST00000384465 108 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
MED28Q9H204 RNU2-8P-201ENST00000410727 190 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 MTCO2P8-201ENST00000412213 658 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 SSR1P2-201ENST00000415208 787 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.79□□□□□ -2.28
MED28Q9H204 AL356583.2-201ENST00000426536 280 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 AC104850.1-201ENST00000435940 476 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 AC004854.1-201ENST00000440356 349 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.79□□□□□ -2.28
MED28Q9H204 AC010095.1-201ENST00000443543 144 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 AC114982.1-201ENST00000469402 321 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 RAP1BP2-201ENST00000478270 544 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 SNORD116-28-201ENST00000516123 91 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 RNU6-1178P-201ENST00000516674 107 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 RN7SKP88-201ENST00000516847 250 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 RNU6-856P-201ENST00000516959 98 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.79□□□□□ -2.28
MED28Q9H204 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.79□□□□□ -2.28
MED28Q9H204 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.79□□□□□ -2.28
MED28Q9H204 MIR3664-201ENST00000579074 99 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 MIR4303-201ENST00000581299 66 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 Z98751.3-201ENST00000604447 521 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 7SK.8-201ENST00000612110 250 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 7SK.11-201ENST00000615477 250 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 AC008147.4-201ENST00000617570 1204 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 AC126177.8-201ENST00000618339 1015 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 7SK.13-201ENST00000622040 250 ntBASIC0.79□□□□□ -2.28
MED28Q9H204 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.79□□□□□ -2.28
MED28Q9H204 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
MED28Q9H204 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms