Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 UBE2WP1-201ENST00000362030 340 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.82-201ENST00000363000 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.92-201ENST00000363043 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.235-201ENST00000364412 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 SNORA71.1-201ENST00000364523 117 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.306-201ENST00000365015 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.312-201ENST00000365089 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.322-201ENST00000365151 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-21P-201ENST00000384710 107 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-1154P-201ENST00000391001 104 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 RPL23AP48-201ENST00000406913 488 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 AC096638.1-201ENST00000444678 216 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.650-201ENST00000459002 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 RPL7P47-201ENST00000497299 556 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.662-201ENST00000516028 97 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.777-201ENST00000516982 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 CYCSP39-201ENST00000565821 309 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.771-201ENST00000598668 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 AL138963.2-201ENST00000605137 226 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.789-201ENST00000622480 102 ntBASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CNTNAP4Q9C0A0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-541P-201ENST00000384709 110 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 SNORD12B-201ENST00000410433 91 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AL139281.1-201ENST00000422120 335 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AC007395.1-201ENST00000451333 677 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.638-201ENST00000459374 113 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AC073901.1-201ENST00000462471 408 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-313P-201ENST00000516317 112 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AC011921.3-201ENST00000605540 361 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AL365222.1-201ENST00000614661 98 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AL136964.1-201ENST00000622038 2990 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 HAUS6P2-201ENST00000433254 2404 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AC000403.1-201ENST00000613696 3585 ntBASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CNTNAP4Q9C0A0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 MIR449A-201ENST00000362113 91 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-222P-201ENST00000362438 107 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RNU5F-3P-201ENST00000363767 117 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.275-201ENST00000364726 110 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-514P-201ENST00000384208 107 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-140P-201ENST00000384566 108 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-1168P-201ENST00000390831 104 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RNU2-61P-201ENST00000411069 191 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RPL19P1-201ENST00000411635 428 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RPL23AP95-201ENST00000426806 265 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 AC243964.1-201ENST00000441814 261 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 AC087477.1-201ENST00000465747 340 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 AP000870.1-201ENST00000472927 406 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-1183P-201ENST00000517054 60 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 IGHVII-62-1-201ENST00000519283 235 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 GTF3AP2-201ENST00000557014 266 ntBASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4□□□□□ -1.77
CNTNAP4Q9C0A0 SNORA25.1-201ENST00000362326 128 ntBASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 SNORA7.2-201ENST00000364446 145 ntBASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.304-201ENST00000365011 112 ntBASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-215P-201ENST00000365169 102 ntBASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 Y_RNA.590-201ENST00000410140 107 ntBASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 RNU6-1135P-201ENST00000411083 103 ntBASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 CR769767.1-201ENST00000436337 346 ntBASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 AC117440.1-201ENST00000474107 571 ntBASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTNAP4Q9C0A0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms