Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RNU7-34P-201ENST00000459394 64 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RAP1BP2-201ENST00000478270 544 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC091435.1-201ENST00000505442 584 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC091874.1-201ENST00000511402 339 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RNU1-41P-201ENST00000516161 162 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RNU1-48P-201ENST00000516400 162 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 Z98751.3-201ENST00000604447 521 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 CTHRC1P1-201ENST00000605383 469 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC040896.1-201ENST00000613819 479 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC126177.8-201ENST00000618339 1015 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC009878.1-201ENST00000621819 340 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC138649.3-201ENST00000622154 254 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RNU6-1287P-201ENST00000362914 107 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 Y_RNA.367-201ENST00000365544 101 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 SNORA36A-201ENST00000384221 132 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 RNU6-1060P-201ENST00000384664 107 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AL117342.1-201ENST00000404861 406 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 COX6CP10-201ENST00000416832 224 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 BTF3P4-201ENST00000418852 495 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC098592.1-201ENST00000419352 333 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 GTF2IP13-201ENST00000438487 386 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC004854.1-201ENST00000440356 349 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.76□□□□□ -2.29
NKX6-2Q9C056 PRPS1P1-201ENST00000445305 876 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 PGBD4P5-201ENST00000445958 426 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 HSPE1P13-201ENST00000451143 297 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC007395.1-201ENST00000451333 677 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.76□□□□□ -2.29
NKX6-2Q9C056 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.76□□□□□ -2.29
NKX6-2Q9C056 RNU6-548P-201ENST00000517083 115 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.76□□□□□ -2.29
NKX6-2Q9C056 SNORD114-21-201ENST00000606412 72 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 TUSC7.1-201ENST00000610969 165 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC008147.4-201ENST00000617570 1204 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AL353770.2-201ENST00000620024 78 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 U6.114-201ENST00000636407 96 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 AC006927.3-201ENST00000638789 384 ntBASIC0.76□□□□□ -2.29
NKX6-2Q9C056 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC092268.1-201ENST00000342691 405 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 RNU1-76P-201ENST00000362903 159 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 SNORA7.1-201ENST00000363750 139 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 RNU5E-5P-201ENST00000365379 116 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 RNA5SP259-201ENST00000365541 109 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 SNORA29-201ENST00000384183 140 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 Y_RNA.504-201ENST00000384481 104 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
NKX6-2Q9C056 SNORA26.3-201ENST00000391119 136 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 MIR208B-201ENST00000401172 77 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC004965.1-201ENST00000413033 213 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 SSR1P2-201ENST00000415208 787 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 MTCO1P21-201ENST00000416634 589 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC078809.1-201ENST00000427601 140 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 USP9YP14-201ENST00000430663 563 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 SNAP23P1-201ENST00000433229 246 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 USP9YP28-201ENST00000435142 589 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AL512286.1-201ENST00000439244 400 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.75□□□□□ -2.29
NKX6-2Q9C056 EPS15P1-201ENST00000448836 336 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 ZNF114P1-201ENST00000453500 292 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 RPS26P45-201ENST00000471748 340 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC087343.1-201ENST00000477341 475 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC034244.1-201ENST00000507687 207 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC104136.1-201ENST00000512969 394 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 RNU6-856P-201ENST00000516959 98 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 RNA5SP503-201ENST00000517047 117 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC109479.2-201ENST00000517842 174 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 EIF4A1P12-201ENST00000551910 141 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.75□□□□□ -2.29
NKX6-2Q9C056 MIR4709-201ENST00000577272 72 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 MIR4513-201ENST00000581077 86 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 BX284668.6-201ENST00000606899 438 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AL133173.2-201ENST00000614270 90 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC011155.2-201ENST00000623202 216 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 AC068647.2-201ENST00000637380 353 ntBASIC0.75□□□□□ -2.29
NKX6-2Q9C056 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
NKX6-2Q9C056 RNU1-22P-201ENST00000363334 158 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 Y_RNA.132-201ENST00000363421 102 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 SNORA33-201ENST00000363664 130 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 RNU4-38P-201ENST00000364472 129 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 RNU6-418P-201ENST00000384035 107 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 SNORA25-201ENST00000384384 134 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 MIR222-201ENST00000384992 110 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.74□□□□□ -2.29
NKX6-2Q9C056 AL117339.3-201ENST00000418733 162 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.74□□□□□ -2.29
NKX6-2Q9C056 SNRPEP10-201ENST00000420249 274 ntBASIC0.74□□□□□ -2.29
NKX6-2Q9C056 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms