Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNU2-25P-201ENST00000411041 191 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 RN7SKP192-201ENST00000411291 327 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AL590135.1-201ENST00000422215 156 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC019205.3-201ENST00000424573 156 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 MTND4P28-201ENST00000426217 387 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC244505.4-201ENST00000434905 287 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 SSXP5-201ENST00000443473 287 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC016700.2-201ENST00000446011 156 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC073901.1-201ENST00000462471 408 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC015911.1-201ENST00000495111 156 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 HMGB1P35-201ENST00000503360 598 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 FRG2DP-202ENST00000566967 323 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 MIR5571-201ENST00000577998 113 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AL034555.1-201ENST00000604816 211 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC009229.3-201ENST00000608056 282 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC009318.2-201ENST00000610917 651 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 MIR7843-201ENST00000622274 79 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 SNORD98-201ENST00000636377 67 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 AC009487.2-201ENST00000420969 6821 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
RTFDC1Q9BY42 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 U8.2-201ENST00000363156 134 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 RNU6-1188P-201ENST00000363795 107 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 RNU6-1180P-201ENST00000364935 107 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 MIR518C-201ENST00000384822 101 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 MIR592-201ENST00000384959 97 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 MIR27B-201ENST00000385129 97 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 RNU2-63P-201ENST00000410792 194 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 AIMP1P2-201ENST00000425294 312 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 AC092427.1-202ENST00000430569 476 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 MTND3P23-201ENST00000431980 347 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 RPL23AP70-201ENST00000483361 460 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 CKS1BP2-201ENST00000497342 240 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 SNORA25.11-201ENST00000515935 105 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 RNA5SP320-201ENST00000516263 124 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 MIR3605-201ENST00000583214 100 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 MIR3117-201ENST00000584034 78 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 AC126177.8-201ENST00000618339 1015 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 AL669831.3-213ENST00000636676 183 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 ZNF299P-201ENST00000406845 1804 ntBASIC3.21□□□□□ -1.9
RTFDC1Q9BY42 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 Y_RNA.315-201ENST00000365117 102 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 SET-203ENST00000372688 801 ntTSL 2 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 MIR504-201ENST00000385065 83 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 AC008267.5-201ENST00000424928 265 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 AL353705.4-201ENST00000449661 238 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 RNU5F-2P-201ENST00000516066 82 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 Y_RNA.670-201ENST00000516255 105 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 MIR3923-201ENST00000579521 83 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 MIR4795-201ENST00000584182 89 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 C8orf59P2-201ENST00000603441 271 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.2□□□□□ -1.9
RTFDC1Q9BY42 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 Y_RNA.61-201ENST00000362835 102 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 RNU6-1159P-201ENST00000362933 107 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 SNORD56.5-201ENST00000364281 72 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 RNU4-9P-201ENST00000364951 139 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 RNY4P36-201ENST00000391116 96 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 AL445687.1-201ENST00000439946 251 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 RN7SKP210-201ENST00000459176 261 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 Y_RNA.632-201ENST00000459189 102 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 SNORD19B-201ENST00000459623 84 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 RN7SL499P-201ENST00000481141 276 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 AC140059.1-201ENST00000489238 361 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 RPS29P21-201ENST00000496272 170 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 U4.3-201ENST00000621047 82 ntBASIC3.19□□□□□ -1.9
RTFDC1Q9BY42 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 Y_RNA.11-201ENST00000362375 109 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 Y_RNA.40-201ENST00000362645 93 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 Y_RNA.67-201ENST00000362870 100 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 RNU6-842P-201ENST00000384269 107 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 SNORA41-201ENST00000384675 132 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 MTCYBP2-201ENST00000407745 171 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 RNU4-14P-201ENST00000410858 122 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 Z98742.3-201ENST00000418637 326 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 RPL23AP50-201ENST00000434149 455 ntBASIC3.18□□□□□ -1.9
RTFDC1Q9BY42 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms