Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1199P-201ENST00000411249 104 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 RN7SKP53-201ENST00000411337 315 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AC009963.1-201ENST00000417265 157 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AL159169.1-201ENST00000421119 127 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AL133547.1-201ENST00000448546 220 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AC074290.1-201ENST00000448883 135 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 HMGB3P8-201ENST00000449709 577 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AP000705.1-201ENST00000454567 350 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 RPL30P12-201ENST00000474666 353 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 RPL31P61-201ENST00000496160 376 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AC107027.2-201ENST00000512197 115 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 RN7SKP164-201ENST00000516138 266 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 RNU6-971P-201ENST00000516920 106 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AC022695.1-201ENST00000522089 237 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AL356575.1-201ENST00000603008 283 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 CR392039.5-201ENST00000623201 510 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 MIR3674-201ENST00000636576 68 ntBASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSBP3Q9BWW4 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 IPO8P1-201ENST00000455509 3109 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AC073073.2-201ENST00000609827 2578 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 Y_RNA.71-201ENST00000362892 104 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 RNU6-324P-201ENST00000363957 106 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 Y_RNA.329-201ENST00000365209 107 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 SNORD116-14-201ENST00000383894 92 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 SNORD116-17-201ENST00000383929 92 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 SNORD116-15-201ENST00000384445 92 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 SNORD116-19-201ENST00000384729 92 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 ELOCP21-201ENST00000412558 336 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 MTND4LP9-201ENST00000427694 174 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 RPL26P9-201ENST00000457466 433 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 Y_RNA.637-201ENST00000459424 114 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AP000873.1-201ENST00000463987 400 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AC078817.1-201ENST00000492623 435 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 RPL30P5-201ENST00000494923 336 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AC026726.1-201ENST00000512859 601 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 SNORA25.12-201ENST00000516202 82 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 SNORA31.23-201ENST00000517219 133 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 CKS1BP7-201ENST00000522230 235 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 MIR4744-201ENST00000581563 82 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 DNAJC19P2-201ENST00000593340 302 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AC006133.1-201ENST00000617106 264 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AL161912.2-201ENST00000565707 3007 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 MAPK10-373ENST00000641983 6772 ntBASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.17□□□□□ -1.9
SSBP3Q9BWW4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AC022336.2-201ENST00000568966 2538 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 MIR423-201ENST00000362201 94 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNU6-199P-201ENST00000362954 107 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNU6-103P-201ENST00000363686 107 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 Y_RNA.218-201ENST00000364218 104 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1325P-201ENST00000364905 105 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNU4-11P-201ENST00000365287 132 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 MIR200C-201ENST00000384980 68 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNU6-578P-201ENST00000390980 103 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RPL39P29-201ENST00000447779 157 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AL500522.2-201ENST00000448562 343 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1211P-201ENST00000459179 105 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AC007215.1-201ENST00000464893 276 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AC091179.3-201ENST00000474761 144 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RPS4XP13-201ENST00000483219 789 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNA5SP309-201ENST00000516670 106 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AC100767.1-201ENST00000528178 123 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AC009163.5-201ENST00000575421 637 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AC012468.1-201ENST00000604888 430 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 MIR3529-201ENST00000637713 78 ntBASIC3.16□□□□□ -1.9
SSBP3Q9BWW4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms