Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU2-46P-201ENST00000517038 113 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC023050.3-201ENST00000541142 333 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 HSPE1P4-201ENST00000550617 308 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 MIR3937-201ENST00000580135 106 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC098848.2-201ENST00000588023 330 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC012507.3-201ENST00000603556 477 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC073413.2-201ENST00000604332 360 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC069114.2-201ENST00000604699 304 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC005014.3-201ENST00000605985 190 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC091304.9-201ENST00000612091 226 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 AC083806.3-201ENST00000614016 455 ntBASIC0.88□□□□□ -2.27
UPK3BQ9BT76 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
UPK3BQ9BT76 MIR302D-201ENST00000362275 68 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 SNORA25.8-201ENST00000364831 128 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 RNU6-336P-201ENST00000364891 107 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 SNORD31B-201ENST00000364977 69 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 RNU6-715P-201ENST00000365204 103 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 RNU6-584P-201ENST00000410350 95 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 RN7SKP61-201ENST00000410642 295 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 MTATP6P19-201ENST00000413797 659 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK3BQ9BT76 RPS6P15-201ENST00000431996 751 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC104850.1-201ENST00000435940 476 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC073614.1-201ENST00000438690 650 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC027119.1-201ENST00000440877 241 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AL022238.1-201ENST00000442557 355 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 ZNF114P1-201ENST00000453500 292 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 MTND2P39-201ENST00000457230 764 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 MTND2P14-201ENST00000482139 351 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK3BQ9BT76 MTCO3P7-201ENST00000510008 774 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 Y_RNA.676-201ENST00000516393 96 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 RNU5F-4P-201ENST00000516581 114 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC019288.1-201ENST00000557918 224 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC068338.1-201ENST00000565567 176 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.87□□□□□ -2.27
UPK3BQ9BT76 VN1R107P-201ENST00000601784 209 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC091805.2-201ENST00000603848 235 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AL355802.3-201ENST00000607571 545 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 PCGEM1.1-201ENST00000613431 131 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AL078604.3-201ENST00000615580 211 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC011155.2-201ENST00000623202 216 ntBASIC0.87□□□□□ -2.27
UPK3BQ9BT76 AC092268.1-201ENST00000342691 405 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 RNU6-862P-201ENST00000362804 105 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 RNU6-428P-201ENST00000362942 107 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 RNU6-1019P-201ENST00000364424 107 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 SNORA12.2-201ENST00000391040 156 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 RNA5SP201-201ENST00000410316 124 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 ARL5AP1-201ENST00000418991 388 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 RPS27P16-201ENST00000425758 201 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.86□□□□□ -2.27
UPK3BQ9BT76 TAF9P1-201ENST00000445421 515 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC079781.2-201ENST00000446424 169 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 EPS15P1-201ENST00000448836 336 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC007395.1-201ENST00000451333 677 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 ATP5J2P3-201ENST00000451550 258 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.86□□□□□ -2.27
UPK3BQ9BT76 TAF9P2-201ENST00000454958 515 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 TOMM22P6-201ENST00000465035 409 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC108078.1-201ENST00000508073 725 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 MTCO3P28-201ENST00000513351 515 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK3BQ9BT76 RNU6-1098P-201ENST00000516772 96 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 RNU6-410P-201ENST00000517006 107 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC090572.1-201ENST00000519251 160 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AP003033.1-201ENST00000527244 415 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC084364.2-201ENST00000546924 395 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.86□□□□□ -2.27
UPK3BQ9BT76 MIR4781-201ENST00000585250 76 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 RPL17P51-201ENST00000605218 238 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 AC008945.2-201ENST00000606056 604 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
UPK3BQ9BT76 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
UPK3BQ9BT76 MTND5P35-201ENST00000557537 1720 ntBASIC0.86□□□□□ -2.27
UPK3BQ9BT76 Y_RNA.132-201ENST00000363421 102 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 RNU6-1214P-201ENST00000363650 109 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 RNU6-1026P-201ENST00000384465 108 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK3BQ9BT76 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.85□□□□□ -2.27
UPK3BQ9BT76 HIGD1AP15-201ENST00000416198 280 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 MTCO1P21-201ENST00000416634 589 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 MRPL35P3-201ENST00000421557 364 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 MTND5P25-201ENST00000430499 799 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 TOMM22P2-201ENST00000430735 237 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 AC099677.2-201ENST00000436385 175 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 Z73417.1-201ENST00000447373 778 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 snoU13.30-201ENST00000458951 104 ntBASIC0.85□□□□□ -2.27
UPK3BQ9BT76 RAP1BP2-201ENST00000478270 544 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms