Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 SNORA46.1-201ENST00000391069 153 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 BTF3L4P2-201ENST00000392798 346 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 RNA5SP201-201ENST00000410316 124 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 MRPS10P2-201ENST00000431226 381 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 NDUFA5P4-201ENST00000436704 385 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AL021397.1-201ENST00000451806 248 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 PRELID3BP1-201ENST00000457142 540 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 snoU13.26-201ENST00000459452 105 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 U8.21-201ENST00000459536 136 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 HMGN2P26-201ENST00000463169 339 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 RPS29P27-201ENST00000463711 170 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC025033.1-201ENST00000463883 194 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC092436.3-201ENST00000511788 257 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC025465.4-201ENST00000513422 638 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 Y_RNA.665-201ENST00000516177 98 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 RNU6-567P-201ENST00000516746 107 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 HSPE1P18-201ENST00000517602 280 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 MTND1P5-201ENST00000517906 940 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC104576.1-201ENST00000524225 88 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC016256.1-201ENST00000547971 354 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC121758.2-201ENST00000553271 193 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC078795.3-201ENST00000602913 472 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AL078605.1-201ENST00000603529 500 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC104458.1-201ENST00000608243 463 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SDF4Q9BRK5 RNU6-254P-201ENST00000363377 107 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 SNORA67.3-201ENST00000384366 140 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.504-201ENST00000384481 104 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.516-201ENST00000384541 124 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.554-201ENST00000384672 102 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 MIR29C-201ENST00000385231 88 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 MIR450B-201ENST00000401182 78 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 MTND1P34-201ENST00000438556 671 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 IPO7P1-201ENST00000442031 636 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 RPL23AP7-203ENST00000449021 469 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 RNU6-717P-201ENST00000459076 104 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 snoU13.15-201ENST00000459407 104 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 RPL9P9-202ENST00000466501 579 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 AC114801.2-201ENST00000503825 781 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.4□□□□□ -2.03
SDF4Q9BRK5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.4□□□□□ -2.03
SDF4Q9BRK5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.4□□□□□ -2.03
SDF4Q9BRK5 MIR1248-201ENST00000629190 106 ntBASIC2.4□□□□□ -2.03
SDF4Q9BRK5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SDF4Q9BRK5 AC092881.1-201ENST00000638218 2733 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.39□□□□□ -2.03
SDF4Q9BRK5 SNORA16B-201ENST00000364674 135 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 RNA5SP160-201ENST00000364866 120 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 RNU6-128P-201ENST00000383976 107 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 MIR518A2-201ENST00000384966 87 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AL023284.1-201ENST00000403956 276 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AL355497.1-201ENST00000406262 551 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 MIR1262-201ENST00000408276 93 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 EIF1AXP1-201ENST00000419267 435 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.39□□□□□ -2.03
SDF4Q9BRK5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 GPM6BP3-201ENST00000442797 145 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AC245102.2-201ENST00000448956 180 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AC104564.1-201ENST00000493028 407 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 TRBVA-201ENST00000498804 316 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 PTP4A1P4-201ENST00000512479 322 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 RPL39P5-202ENST00000512505 151 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 RNU6-1332P-201ENST00000516666 104 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 MTND1P35-201ENST00000526739 508 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 CYP4A27P-201ENST00000567218 190 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AC002984.1-201ENST00000591692 448 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AC005520.5-201ENST00000613926 164 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.39□□□□□ -2.03
SDF4Q9BRK5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AP000553.5-201ENST00000641933 54 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 AC009541.1-201ENST00000438279 2662 ntBASIC2.39□□□□□ -2.03
SDF4Q9BRK5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AL596028.1-201ENST00000326971 197 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 RNU6-1159P-201ENST00000362933 107 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 SNORD113-7-201ENST00000363762 77 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.373-201ENST00000365600 103 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.450-201ENST00000384198 113 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 RNU6-1215P-201ENST00000384441 102 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.530-201ENST00000384587 101 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 Y_RNA.615-201ENST00000410769 117 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 RNU6-373P-201ENST00000411247 98 ntBASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.38□□□□□ -2.03
SDF4Q9BRK5 AC007229.1-201ENST00000590455 412 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms