Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.53□□□□□ -2.16
FOXC2Q99958 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
FOXC2Q99958 AC007375.1-201ENST00000554513 578 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.53□□□□□ -2.16
FOXC2Q99958 AC091805.2-201ENST00000603848 235 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AC007684.1-201ENST00000609671 477 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 AC026585.1-201ENST00000619582 524 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 U1.36-201ENST00000620684 176 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.53□□□□□ -2.16
FOXC2Q99958 RNU6-552P-201ENST00000362869 119 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 RNU6-1164P-201ENST00000364428 107 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 RNU6-1303P-201ENST00000364841 107 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 RNU6-517P-201ENST00000384362 110 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 RNU6-393P-201ENST00000384475 107 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 OR9R1P-201ENST00000412200 877 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.52□□□□□ -2.17
FOXC2Q99958 AC016907.1-201ENST00000419483 435 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 UBE2V1P4-201ENST00000425374 344 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC002486.1-201ENST00000435098 391 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 HMGB1P31-201ENST00000437242 427 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.52□□□□□ -2.17
FOXC2Q99958 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXC2Q99958 AL163973.1-201ENST00000484753 577 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC079382.1-201ENST00000493346 557 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC010493.1-201ENST00000513479 292 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 RNU6-1178P-201ENST00000516674 107 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC104383.1-201ENST00000530297 370 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.52□□□□□ -2.17
FOXC2Q99958 AL137161.1-201ENST00000532231 390 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXC2Q99958 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.52□□□□□ -2.17
FOXC2Q99958 AC022254.1-201ENST00000567857 235 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.52□□□□□ -2.17
FOXC2Q99958 AL136363.2-201ENST00000604173 851 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 uc_338.5-201ENST00000611839 155 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
FOXC2Q99958 AC068792.1-201ENST00000621354 417 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 DUXAP9-208ENST00000622815 614 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC022418.1-201ENST00000624118 445 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AC124864.2-201ENST00000624736 186 ntBASIC1.52□□□□□ -2.17
FOXC2Q99958 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.52□□□□□ -2.17
FOXC2Q99958 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.51□□□□□ -2.17
FOXC2Q99958 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 AL354685.2-201ENST00000448218 1447 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 Y_RNA.41-201ENST00000362646 102 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-1-201ENST00000383898 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-42P-201ENST00000384165 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-36P-201ENST00000384172 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-4P-201ENST00000384205 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-5P-201ENST00000384238 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-3P-201ENST00000384314 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-2-201ENST00000384627 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-9-201ENST00000384776 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-33P-201ENST00000384793 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
FOXC2Q99958 SNORD70.1-201ENST00000391007 85 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 AL033519.2-201ENST00000403958 392 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU4-55P-201ENST00000410731 137 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 AL358453.1-201ENST00000422522 250 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 MTCYBP8-201ENST00000422855 651 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 CBX3P6-201ENST00000430257 527 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 AL606489.2-201ENST00000433886 234 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXC2Q99958 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXC2Q99958 AC009474.2-201ENST00000451383 136 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 SCARNA18-201ENST00000459004 134 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 TOMM22P6-201ENST00000465035 409 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RPL30P12-201ENST00000474666 353 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXC2Q99958 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU2-44P-201ENST00000516795 194 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-835P-201ENST00000516974 104 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 HIF1AP1-201ENST00000553642 175 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.51□□□□□ -2.17
FOXC2Q99958 MIR4713-201ENST00000582691 75 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 SNRPGP19-201ENST00000603826 189 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 RNU6-6P-201ENST00000606623 107 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 AC103591.3-201ENST00000608684 209 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.51□□□□□ -2.17
FOXC2Q99958 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
FOXC2Q99958 snoU2_19.1-201ENST00000362361 80 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 RNU1-58P-201ENST00000362413 163 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 Y_RNA.255-201ENST00000364581 97 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 RNU4-75P-201ENST00000364621 146 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 Y_RNA.296-201ENST00000364930 108 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 Y_RNA.324-201ENST00000365165 102 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 RNU6-996P-201ENST00000365438 107 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 RNU6-434P-201ENST00000384376 107 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 Y_RNA.540-201ENST00000384638 111 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 RNU2-20P-201ENST00000410425 191 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 DLGAP5P1-201ENST00000430307 464 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 IFNA20P-201ENST00000436840 528 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 AC007969.2-201ENST00000441891 191 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.5□□□□□ -2.17
FOXC2Q99958 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.5□□□□□ -2.17
FOXC2Q99958 AC013470.1-201ENST00000453438 462 ntBASIC1.5□□□□□ -2.17
FOXC2Q99958 AC083798.1-201ENST00000472671 131 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms