Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 EIF1AXP1-201ENST00000419267 435 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 AL513185.2-201ENST00000425543 193 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 USP9YP28-201ENST00000435142 589 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 RNU7-187P-201ENST00000458985 68 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40CQ96S21 RNA5SP356-201ENST00000515972 94 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 RNU6-1314P-201ENST00000517139 104 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.91□□□□□ -2.1
RAB40CQ96S21 AP000907.4-201ENST00000604143 237 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 AL138726.1-201ENST00000614873 333 ntBASIC1.91□□□□□ -2.1
RAB40CQ96S21 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.91□□□□□ -2.1
RAB40CQ96S21 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.91□□□□□ -2.1
RAB40CQ96S21 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
RAB40CQ96S21 AC016717.2-201ENST00000609089 5141 ntBASIC1.9□□□□□ -2.1
RAB40CQ96S21 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
RAB40CQ96S21 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RAB40CQ96S21 Y_RNA.123-201ENST00000363338 102 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 SNORD32B-201ENST00000364460 84 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 MIR521-1-201ENST00000384902 87 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 RNA5SP201-201ENST00000410316 124 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 Y_RNA.619-201ENST00000410951 90 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
RAB40CQ96S21 AC104435.1-201ENST00000483483 166 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.9□□□□□ -2.11
RAB40CQ96S21 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.9□□□□□ -2.11
RAB40CQ96S21 RN7SKP24-201ENST00000515888 284 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.9□□□□□ -2.11
RAB40CQ96S21 AP000889.1-201ENST00000530968 660 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 CYP4A27P-201ENST00000567218 190 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 MIR4319-201ENST00000577285 85 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 SNORD53-201ENST00000579969 78 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 MIR3672-201ENST00000584290 82 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 AL109918.3-201ENST00000603072 338 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 AC009033.1-201ENST00000624279 431 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.9□□□□□ -2.11
RAB40CQ96S21 MIR1291-201ENST00000627649 87 ntBASIC1.9□□□□□ -2.11
RAB40CQ96S21 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.11
RAB40CQ96S21 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 ZNF702P-202ENST00000434269 1966 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 RNU6-562P-201ENST00000362731 107 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 RNU6-95P-201ENST00000384697 107 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 AL359511.1-201ENST00000402970 211 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 AL590632.1-201ENST00000424289 371 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AL645568.3-201ENST00000433683 316 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 PRELID3BP1-201ENST00000457142 540 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AP001486.1-201ENST00000463339 476 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AL049873.1-201ENST00000480540 376 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC021146.2-201ENST00000504736 556 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 MIR514B-201ENST00000516774 80 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 HSPE1P18-201ENST00000517602 280 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC109446.1-201ENST00000566172 220 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 CPDP1-201ENST00000579660 283 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 MIR3942-201ENST00000585264 109 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC005034.5-201ENST00000604219 466 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AP000654.2-201ENST00000605633 586 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AL133215.3-201ENST00000609801 448 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 MIR8076-201ENST00000611401 83 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC002553.4-201ENST00000616896 331 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 MIR1248-201ENST00000629190 106 ntBASIC1.89□□□□□ -2.11
RAB40CQ96S21 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RAB40CQ96S21 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RAB40CQ96S21 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
RAB40CQ96S21 AC062016.1-201ENST00000355719 319 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 Y_RNA.135-201ENST00000363439 95 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 U3.9-201ENST00000363823 204 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 Y_RNA.212-201ENST00000364177 102 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 SNORA32.2-201ENST00000384049 122 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 RNU6-790P-201ENST00000384479 105 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 MIR208B-201ENST00000401172 77 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 RNU6-1148P-201ENST00000410992 104 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 SRIP3-201ENST00000413200 219 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.88□□□□□ -2.11
RAB40CQ96S21 AC012306.1-201ENST00000423267 114 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 AC096920.1-201ENST00000423991 241 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 AL353689.1-201ENST00000438895 199 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 RPL23AP3-201ENST00000453844 468 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 AC090255.1-201ENST00000495779 349 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 MIR449C-201ENST00000516047 92 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 RNU6-273P-201ENST00000516937 96 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.88□□□□□ -2.11
RAB40CQ96S21 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms