Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC092104.1-201ENST00000497346 1441 ntBASIC0.53□□□□□ -2.32
ALPK3Q96L96 Y_RNA.33-201ENST00000362591 102 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 RNU6-1285P-201ENST00000363480 105 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 RNU2-64P-201ENST00000411315 191 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 PIGPP2-201ENST00000411569 458 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AL353777.1-201ENST00000425552 326 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 HSPE1P9-201ENST00000440046 311 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 AL512506.1-201ENST00000613918 449 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 MIR515-2-201ENST00000384883 83 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 MIR515-1-201ENST00000384884 83 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 SNORA40.2-201ENST00000390847 128 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 RNU2-39P-201ENST00000410604 198 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 LARP1BP3-201ENST00000437229 869 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AL008629.1-201ENST00000438615 184 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 snoU13.30-201ENST00000458951 104 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 SNORA3.4-201ENST00000515969 96 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 RN7SKP88-201ENST00000516847 250 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AC107934.1-201ENST00000522215 217 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 CENPUP1-201ENST00000526649 1202 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 EIF4A1P12-201ENST00000551910 141 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.52□□□□□ -2.33
ALPK3Q96L96 AL606834.3-201ENST00000602615 496 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 AL592221.1-201ENST00000605266 382 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 7SK.8-201ENST00000612110 250 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 7SK.11-201ENST00000615477 250 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 7SK.13-201ENST00000622040 250 ntBASIC0.52□□□□□ -2.33
ALPK3Q96L96 RNU6-960P-201ENST00000364056 120 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 RNU1-96P-201ENST00000364163 162 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
ALPK3Q96L96 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
ALPK3Q96L96 RPS3AP36-201ENST00000398190 775 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 AC069282.1-201ENST00000411911 526 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 AC137499.1-201ENST00000427602 88 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 MTND1P30-201ENST00000441241 901 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 Y_RNA.687-201ENST00000516558 91 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 AL442163.3-201ENST00000554110 156 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 MIR5589-201ENST00000579442 60 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 MIR544B-201ENST00000582372 78 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 AC078795.2-201ENST00000602835 1252 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 AC072039.2-201ENST00000608883 439 ntBASIC0.51□□□□□ -2.33
ALPK3Q96L96 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.51□□□□□ -2.33
ALPK3Q96L96 RNU6-527P-201ENST00000363425 104 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 MRPL35P1-201ENST00000404272 572 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 RNU2-3P-201ENST00000410144 191 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 SNX2P2-201ENST00000424553 323 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 RPS23P5-201ENST00000495419 428 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC069114.2-201ENST00000604699 304 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
ALPK3Q96L96 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC010615.1-201ENST00000594254 1764 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AL159152.1-201ENST00000635019 2587 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 MIR302D-201ENST00000362275 68 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 RNA5SP111-201ENST00000411386 101 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.5□□□□□ -2.33
ALPK3Q96L96 ARL5AP1-201ENST00000418991 388 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.5□□□□□ -2.33
ALPK3Q96L96 MTND4P20-201ENST00000424125 869 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AL589872.1-201ENST00000426602 288 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AL591043.1-201ENST00000432461 424 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC243964.1-201ENST00000441814 261 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC119751.4-201ENST00000507498 357 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC010587.2-201ENST00000511727 448 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC091163.3-201ENST00000518269 1144 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.5□□□□□ -2.33
ALPK3Q96L96 MIR5692A1-201ENST00000580523 69 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 MIR3136-201ENST00000583498 78 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AL391001.1-201ENST00000602747 715 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC092106.3-201ENST00000611308 722 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 MIR6718-201ENST00000616153 80 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 AC024940.5-201ENST00000622889 474 ntBASIC0.5□□□□□ -2.33
ALPK3Q96L96 RNU6-212P-201ENST00000362642 104 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 RNY4P24-201ENST00000362735 96 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 SNORD56.1-201ENST00000362913 68 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 SNORA72.2-201ENST00000365028 127 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
ALPK3Q96L96 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
ALPK3Q96L96 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.49□□□□□ -2.33
ALPK3Q96L96 SNORD124-201ENST00000459577 104 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 RPS26P45-201ENST00000471748 340 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 AC097473.1-201ENST00000508142 408 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 RNA5SP285-201ENST00000516619 119 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 SUMO2P18-201ENST00000518873 252 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 SUMO2P16-201ENST00000519475 264 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 AC136628.3-201ENST00000521868 290 ntBASIC0.49□□□□□ -2.33
ALPK3Q96L96 AP003327.1-201ENST00000529684 127 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 802.4 ms