Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC005972.2-201ENST00000604690 348 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 AL021707.8-201ENST00000609428 183 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 AL138721.1-201ENST00000616756 179 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-CQ95604 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-CQ95604 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-CQ95604 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-CQ95604 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.58□□□□□ -1.68
HLA-CQ95604 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
HLA-CQ95604 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-CQ95604 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-CQ95604 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-CQ95604 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-CQ95604 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-CQ95604 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-CQ95604 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-CQ95604 SNORA73.2-201ENST00000364946 201 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 RNU6-1080P-201ENST00000383982 107 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 MIR34B-201ENST00000385076 84 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 MIR147B-201ENST00000390185 80 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 AL603914.1-201ENST00000401964 204 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 AC023141.4-201ENST00000412031 328 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-CQ95604 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.57□□□□□ -1.68
HLA-CQ95604 RNA5SP103-201ENST00000459503 118 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 RN7SL812P-201ENST00000493791 279 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 RNA5SP519-201ENST00000516480 119 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 RNA5SP153-201ENST00000516498 76 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 RNU6-1337P-201ENST00000516525 95 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-CQ95604 AC093732.2-201ENST00000607950 274 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 FAM27D1-201ENST00000612308 341 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 AL121772.2-201ENST00000614331 297 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HLA-CQ95604 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HLA-CQ95604 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-CQ95604 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-CQ95604 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-CQ95604 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HLA-CQ95604 AC073346.2-201ENST00000624724 2058 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 AC000403.1-201ENST00000613696 3585 ntBASIC4.57□□□□□ -1.68
HLA-CQ95604 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-CQ95604 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-CQ95604 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-CQ95604 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-CQ95604 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-CQ95604 RNA5SP124-201ENST00000362739 110 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 Y_RNA.114-201ENST00000363265 113 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 RNU6-1305P-201ENST00000364353 104 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-CQ95604 RNU1-57P-201ENST00000384491 166 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 MIR548A3-201ENST00000385297 97 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 AL645939.1-201ENST00000453429 797 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 RNA5SP310-201ENST00000459084 116 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 RPS26P55-201ENST00000471178 356 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 AL592156.1-201ENST00000508758 304 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 AC040958.1-201ENST00000561102 201 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 AC004832.5-201ENST00000608677 401 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 MIR6076-201ENST00000617521 113 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 MIR6891-201ENST00000618788 93 ntBASIC4.56□□□□□ -1.68
HLA-CQ95604 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HLA-CQ95604 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HLA-CQ95604 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-CQ95604 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HLA-CQ95604 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-CQ95604 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-CQ95604 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-CQ95604 AC000123.3-201ENST00000624029 4975 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-CQ95604 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-CQ95604 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 RNU1-14P-201ENST00000362759 152 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 U8.1-201ENST00000362843 134 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 SNORD18B-201ENST00000365659 72 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 RNU6-484P-201ENST00000384016 107 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 AL133475.1-201ENST00000404414 305 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-CQ95604 AC006028.1-201ENST00000438379 402 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-CQ95604 RNU7-23P-201ENST00000459465 62 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
HLA-CQ95604 AC091178.2-201ENST00000584401 117 ntBASIC4.55□□□□□ -1.68
HLA-CQ95604 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-CQ95604 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-CQ95604 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-CQ95604 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-CQ95604 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-CQ95604 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-CQ95604 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-CQ95604 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-CQ95604 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-CQ95604 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-CQ95604 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-CQ95604 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-CQ95604 SNORA27.1-201ENST00000362604 124 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 SNORD58C-201ENST00000365223 64 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 RNU6-32P-201ENST00000383948 107 ntBASIC4.54□□□□□ -1.68
HLA-CQ95604 RNU6-13P-201ENST00000384248 107 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms