Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 UBL5P1-201ENST00000507979 193 ntBASIC0.75□□□□□ -2.29
TOPBP1Q92547 AC112206.3-201ENST00000514578 389 ntBASIC0.75□□□□□ -2.29
TOPBP1Q92547 SNORA19.3-201ENST00000516165 130 ntBASIC0.75□□□□□ -2.29
TOPBP1Q92547 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.75□□□□□ -2.29
TOPBP1Q92547 EIF4A1P12-201ENST00000551910 141 ntBASIC0.75□□□□□ -2.29
TOPBP1Q92547 MIR4802-201ENST00000581881 80 ntBASIC0.75□□□□□ -2.29
TOPBP1Q92547 AC090578.1-201ENST00000604955 591 ntBASIC0.75□□□□□ -2.29
TOPBP1Q92547 AL359547.2-201ENST00000615810 418 ntBASIC0.75□□□□□ -2.29
TOPBP1Q92547 SCARNA4-202ENST00000625402 129 ntBASIC0.75□□□□□ -2.29
TOPBP1Q92547 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TOPBP1Q92547 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 RNU6-511P-201ENST00000363496 107 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 MIR544A-201ENST00000384855 91 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 MIR520A-201ENST00000384862 85 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AC123900.1-201ENST00000420390 96 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.74□□□□□ -2.29
TOPBP1Q92547 EIF1P1-201ENST00000421436 341 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AC006366.1-201ENST00000422002 759 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.74□□□□□ -2.29
TOPBP1Q92547 AL008629.1-201ENST00000438615 184 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AC132479.1-201ENST00000449160 144 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 OR2AQ1P-201ENST00000451972 200 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.74□□□□□ -2.29
TOPBP1Q92547 AC079140.3-201ENST00000511111 550 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 SNORA3.4-201ENST00000515969 96 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 RNU7-40P-201ENST00000516397 64 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AL136363.2-201ENST00000604173 851 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 BCRP9-201ENST00000605312 388 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AC099654.5-201ENST00000636479 350 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TOPBP1Q92547 RNU4-67P-201ENST00000364569 141 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 RNU6-968P-201ENST00000384076 107 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 RNU6-1179P-201ENST00000384667 107 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AL136310.1-201ENST00000404926 654 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.74□□□□□ -2.29
TOPBP1Q92547 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 PGBD4P5-201ENST00000445958 426 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 snoU13.19-201ENST00000459148 104 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AL163195.1-201ENST00000496941 348 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 RNU5A-4P-201ENST00000516588 111 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AP003465.2-201ENST00000602571 373 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 BNIP3P31-201ENST00000604515 566 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 FAM157A-202ENST00000615155 405 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AL121895.2-201ENST00000619558 447 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 AC009033.1-201ENST00000624279 431 ntBASIC0.74□□□□□ -2.29
TOPBP1Q92547 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.74□□□□□ -2.29
TOPBP1Q92547 SNORD116.1-201ENST00000365628 92 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 SNORA2A-201ENST00000383885 135 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 SNORA29-201ENST00000384183 140 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 AC245047.4-201ENST00000433189 144 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.73□□□□□ -2.29
TOPBP1Q92547 AC005741.1-201ENST00000511094 432 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 RNU6-276P-201ENST00000516114 96 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.73□□□□□ -2.29
TOPBP1Q92547 AC091163.3-201ENST00000518269 1144 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.73□□□□□ -2.29
TOPBP1Q92547 AC068587.4-201ENST00000533893 186 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 AL391001.1-201ENST00000602747 715 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 MZT1P2-201ENST00000604387 248 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 RNU6-87P-201ENST00000607561 108 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 AC091965.4-201ENST00000607691 587 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 RMST_7.1-201ENST00000621935 268 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 AC010615.1-201ENST00000594254 1764 ntBASIC0.73□□□□□ -2.29
TOPBP1Q92547 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TOPBP1Q92547 RNU6-527P-201ENST00000363425 104 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 RNU6-438P-201ENST00000365561 103 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 SNORA12-201ENST00000391162 147 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 MRPL35P1-201ENST00000404272 572 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.72□□□□□ -2.29
TOPBP1Q92547 Z95118.1-201ENST00000421372 247 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.72□□□□□ -2.29
TOPBP1Q92547 AC007969.2-201ENST00000441891 191 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 DYNLT3P2-201ENST00000442517 295 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 MTCO3P9-201ENST00000506989 781 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 MTND3P5-201ENST00000512798 333 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.72□□□□□ -2.29
TOPBP1Q92547 AC013828.2-201ENST00000532487 235 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 AC123904.2-201ENST00000548059 300 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 ADI1P3-201ENST00000549509 470 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 HMGN1P30-201ENST00000589286 268 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 DEFB131E-202ENST00000602581 683 ntBASIC0.72□□□□□ -2.29
TOPBP1Q92547 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.72□□□□□ -2.29
TOPBP1Q92547 RNY4P24-201ENST00000362735 96 ntBASIC0.71□□□□□ -2.3
TOPBP1Q92547 RNU6-384P-201ENST00000364900 104 ntBASIC0.71□□□□□ -2.3
TOPBP1Q92547 MTCO3P41-201ENST00000414801 328 ntBASIC0.71□□□□□ -2.3
TOPBP1Q92547 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.71□□□□□ -2.3
TOPBP1Q92547 AC109446.1-201ENST00000566172 220 ntBASIC0.71□□□□□ -2.3
TOPBP1Q92547 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.71□□□□□ -2.3
TOPBP1Q92547 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.71□□□□□ -2.3
TOPBP1Q92547 AC018889.1-201ENST00000605372 397 ntBASIC0.71□□□□□ -2.3
TOPBP1Q92547 AL158211.2-201ENST00000607282 395 ntBASIC0.71□□□□□ -2.3
TOPBP1Q92547 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.71□□□□□ -2.3
TOPBP1Q92547 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
TOPBP1Q92547 RNU4-15P-201ENST00000362613 141 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 Y_RNA.46-201ENST00000362695 102 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 RNU6-862P-201ENST00000362804 105 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 RNU6-371P-201ENST00000364283 108 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 RNU6-1019P-201ENST00000364424 107 ntBASIC0.7□□□□□ -2.3
TOPBP1Q92547 AC114491.1-201ENST00000416095 246 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms