Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU1-105P-201ENST00000363470 161 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 RNU6-1285P-201ENST00000363480 105 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.152-201ENST00000363578 100 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 SNORA9.2-201ENST00000365361 133 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.358-201ENST00000365491 99 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 SNORA63.7-201ENST00000365579 123 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 RNU6-17P-201ENST00000384245 107 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 RNU6-18P-201ENST00000384527 107 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 MIR491-201ENST00000384877 84 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 MIR568-201ENST00000385036 95 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 MIR483-201ENST00000385070 76 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 MIR147B-201ENST00000390185 80 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 SNORA26.3-201ENST00000391119 136 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 MIR887-201ENST00000401258 79 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 RN7SKP123-201ENST00000410732 291 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 AC114482.1-201ENST00000418010 247 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 RPL21P40-201ENST00000428586 483 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 AC004383.1-201ENST00000438135 289 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 ANXA2P1-201ENST00000505539 926 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 MRPS35P2-201ENST00000508242 191 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 AC131281.1-201ENST00000522984 164 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 AC021231.3-201ENST00000558497 370 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 RPS15AP11-201ENST00000594193 385 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 AC007792.1-201ENST00000623023 402 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 MIR6733-201ENST00000635723 61 ntBASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.96□□□□□ -1.94
ATG4AQ8WYN0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 MAPK10-322ENST00000641485 4530 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.47-201ENST00000362697 108 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.176-201ENST00000363815 109 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 RNU4-50P-201ENST00000364361 141 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 SNORA51.11-201ENST00000384442 131 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 MIR767-201ENST00000390228 109 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 RNU6-1140P-201ENST00000410517 106 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 BX510359.1-201ENST00000456973 237 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 RNU7-87P-201ENST00000459343 62 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AC003982.1-202ENST00000469928 248 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 GZMAP1-201ENST00000503054 631 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 RNU6-635P-201ENST00000516651 102 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 SNORD59.2-201ENST00000516873 68 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 MIR2355-201ENST00000517199 87 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AC115990.1-201ENST00000526957 301 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 COX6CP5-201ENST00000527162 228 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 MIR5195-201ENST00000583555 115 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AC004832.5-201ENST00000608677 401 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AC096772.1-201ENST00000609146 564 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AL359198.2-201ENST00000611836 194 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AL450472.1-202ENST00000637286 180 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 AC092593.1-201ENST00000515413 1815 ntBASIC2.95□□□□□ -1.94
ATG4AQ8WYN0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 RNU6-525P-201ENST00000363685 104 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 U3.13-201ENST00000364804 214 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.551-201ENST00000384661 102 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.574-201ENST00000384766 95 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 MIR32-201ENST00000384965 70 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 MIR153-2-201ENST00000385225 87 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AL133475.1-201ENST00000404414 305 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 CYCSP48-201ENST00000417124 323 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AC073910.1-201ENST00000445047 438 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 RPL27AP5-201ENST00000469428 449 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AC109329.1-201ENST00000518744 317 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AC105137.2-201ENST00000569073 466 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AC090617.3-201ENST00000573670 475 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AC012493.2-201ENST00000595083 291 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 RPS29P30-201ENST00000600975 111 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AL390123.1-201ENST00000603216 237 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 YPEL5P2-201ENST00000605553 359 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AL159153.1-201ENST00000619688 317 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AC137590.2-201ENST00000619709 240 ntBASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ATG4AQ8WYN0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 RNU6-1010P-201ENST00000362757 107 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 Y_RNA.210-201ENST00000364161 110 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 SNORA9-201ENST00000384215 133 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 SNORA36A-201ENST00000384221 132 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 RNU6-574P-201ENST00000384265 107 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 RNU6-1109P-201ENST00000391187 107 ntBASIC2.93□□□□□ -1.94
ATG4AQ8WYN0 RPL21P75-201ENST00000396599 483 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms