Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.06□□□□□ -2.24
LMX1AQ8TE12 RNVU1-2-201ENST00000516326 135 ntBASIC1.06□□□□□ -2.24
LMX1AQ8TE12 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.06□□□□□ -2.24
LMX1AQ8TE12 AC023050.3-201ENST00000541142 333 ntBASIC1.06□□□□□ -2.24
LMX1AQ8TE12 AP005136.1-201ENST00000579765 429 ntBASIC1.06□□□□□ -2.24
LMX1AQ8TE12 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.06□□□□□ -2.24
LMX1AQ8TE12 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
LMX1AQ8TE12 AC022513.1-201ENST00000624512 117 ntBASIC1.06□□□□□ -2.24
LMX1AQ8TE12 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
LMX1AQ8TE12 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC091812.1-201ENST00000432235 1948 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 MIR340-201ENST00000362125 95 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 RNU6-553P-201ENST00000364047 96 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 SNORA72.3-201ENST00000365074 132 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 RNU6-142P-201ENST00000384019 107 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 RNU6-116P-201ENST00000384042 109 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 MIR613-201ENST00000385248 95 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 RNU2-41P-201ENST00000410991 178 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 HIGD1AP15-201ENST00000416198 280 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AL591704.2-201ENST00000421658 181 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 CYCSP46-201ENST00000423569 204 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC010099.3-201ENST00000423896 409 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC015922.2-201ENST00000435593 184 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 MTND2P4-201ENST00000445034 1004 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC079448.1-201ENST00000449377 373 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 RNU1-131P-201ENST00000458943 161 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 MTCO2P6-201ENST00000463134 685 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 ARL2BPP4-201ENST00000506854 471 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC025465.3-201ENST00000510570 311 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 RN7SKP179-201ENST00000516126 217 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 RNU6-415P-201ENST00000516252 97 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 RNU6-410P-201ENST00000517006 107 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 MTCO3P23-201ENST00000561363 289 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 MIR3682-201ENST00000581338 84 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 MIR548AB-201ENST00000584917 84 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 BNIP3P16-201ENST00000589779 534 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC123912.5-201ENST00000605470 343 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AL360219.1-201ENST00000610230 366 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 AC104073.3-201ENST00000610942 955 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.05□□□□□ -2.24
LMX1AQ8TE12 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
LMX1AQ8TE12 U3.4-201ENST00000363352 213 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 RNU6-527P-201ENST00000363425 104 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 RNY1-201ENST00000364228 113 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 RNU6-1141P-201ENST00000364520 107 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 SNORD32A-201ENST00000364805 84 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 RNU6-715P-201ENST00000365204 103 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.04□□□□□ -2.24
LMX1AQ8TE12 SNORA18.2-201ENST00000383865 132 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 RNU6-160P-201ENST00000384591 107 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
LMX1AQ8TE12 SNORA26.3-201ENST00000391119 136 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 MTCYBP2-201ENST00000407745 171 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 GPR143P-201ENST00000434155 205 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 AL596276.1-201ENST00000434465 418 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 SNORD42A-201ENST00000459584 64 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.04□□□□□ -2.24
LMX1AQ8TE12 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.04□□□□□ -2.24
LMX1AQ8TE12 MTND3P5-201ENST00000512798 333 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 RNU6-113P-201ENST00000516653 101 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 RNU6-232P-201ENST00000517144 64 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 AC109479.2-201ENST00000517842 174 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 ZNF321P-202ENST00000550843 495 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.04□□□□□ -2.24
LMX1AQ8TE12 AC109446.2-201ENST00000567872 497 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.04□□□□□ -2.24
LMX1AQ8TE12 MIR3136-201ENST00000583498 78 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 MIR151B-201ENST00000584249 96 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 AP001485.1-201ENST00000604799 199 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
LMX1AQ8TE12 AC122133.1-201ENST00000613964 233 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 uc_338.11-201ENST00000619132 160 ntBASIC1.04□□□□□ -2.24
LMX1AQ8TE12 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.04□□□□□ -2.24
LMX1AQ8TE12 RNU6-37P-201ENST00000362692 107 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU4-21P-201ENST00000362802 126 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU5F-7P-201ENST00000363696 115 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-743P-201ENST00000364151 106 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-11P-201ENST00000364234 107 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-25P-201ENST00000383873 107 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-48P-201ENST00000384161 107 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-43P-201ENST00000384302 107 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-16P-201ENST00000384385 107 ntBASIC1.03□□□□□ -2.24
LMX1AQ8TE12 RNU6-15P-201ENST00000384534 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms