Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU7-175P-201ENST00000515915 61 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC007375.1-201ENST00000554513 578 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC060766.3-201ENST00000591442 263 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC008737.2-201ENST00000599446 118 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC096772.1-201ENST00000609146 564 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 AC080128.1-201ENST00000474389 1917 ntBASIC3.54□□□□□ -1.84
SMC1BQ8NDV3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AC005592.1-201ENST00000566527 1640 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 RNA5SP68-201ENST00000363885 119 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 SNORD32A-201ENST00000364805 84 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 RNU4-9P-201ENST00000364951 139 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 RNU6-622P-201ENST00000384272 103 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 Y_RNA.605-201ENST00000410577 105 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 RPL23AP95-201ENST00000426806 265 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AL353705.4-201ENST00000449661 238 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AC016632.1-201ENST00000503994 196 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 RNU6-475P-201ENST00000516073 104 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AC016256.1-201ENST00000547971 354 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 HSPE1P4-201ENST00000550617 308 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AC105137.2-201ENST00000569073 466 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 MIR1244-1-201ENST00000612829 85 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 MIR6817-201ENST00000615588 66 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AC007792.1-201ENST00000623023 402 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AL606534.2-204ENST00000635008 178 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 MIR1244-3-201ENST00000635744 85 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 MIR1244-2-201ENST00000636449 85 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 MIR1244-4-202ENST00000636813 85 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 MAPK10-362ENST00000641864 4484 ntBASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMC1BQ8NDV3 AC002543.1-201ENST00000299783 1954 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 RNU1-101P-201ENST00000391171 127 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 RNA5SP494-201ENST00000410653 129 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 AC009969.1-201ENST00000438726 172 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 RPL39P29-201ENST00000447779 157 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 RPS3P1-201ENST00000456781 192 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 RPS27AP9-201ENST00000477681 438 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 MIR4680-201ENST00000580906 66 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 AL391813.1-201ENST00000603098 260 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 AC100812.1-201ENST00000607622 580 ntBASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.52□□□□□ -1.85
SMC1BQ8NDV3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 Y_RNA.459-201ENST00000384251 102 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 MIR592-201ENST00000384959 97 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 RN7SKP61-201ENST00000410642 295 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AC138623.1-201ENST00000418060 216 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 RPL30P12-201ENST00000474666 353 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AC021205.2-201ENST00000480069 347 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 Y_RNA.706-201ENST00000516933 99 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 Y_RNA.720-201ENST00000517166 92 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AC091144.1-201ENST00000519573 138 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 HSBP1P1-201ENST00000555205 166 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AC104581.2-201ENST00000572227 430 ntBASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SMC1BQ8NDV3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 RNA5SP139-201ENST00000364340 117 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 RNU4-42P-201ENST00000364738 142 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 Y_RNA.504-201ENST00000384481 104 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 MIR9-1-201ENST00000385198 89 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 GPM6BP3-201ENST00000442797 145 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 HMGN1P18-201ENST00000457642 277 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 HMGN1P10-201ENST00000474557 553 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 AC091874.1-201ENST00000511402 339 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 SNORA64.4-201ENST00000516632 81 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 RNU4-77P-201ENST00000516692 156 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 Y_RNA.721-201ENST00000517207 102 ntBASIC3.5□□□□□ -1.85
SMC1BQ8NDV3 AC115990.1-201ENST00000526957 301 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms