Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL356968.1-201ENST00000416622 474 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 COTL1P1-201ENST00000422309 375 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 U8.22-201ENST00000459141 133 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 RNU6-1046P-201ENST00000516538 107 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 AP006245.1-201ENST00000522549 120 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 AC090617.3-201ENST00000573670 475 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 MIR3671-201ENST00000580455 88 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 MIR4425-201ENST00000580572 84 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 RPS29P30-201ENST00000600975 111 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 AC005296.1-201ENST00000616145 209 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 MIR7157-201ENST00000635801 60 ntBASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SYNPOQ8N3V7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 AC069528.2-201ENST00000624849 1991 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 RNU4-15P-201ENST00000362613 141 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 Y_RNA.144-201ENST00000363521 113 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 U8.10-201ENST00000384260 133 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 AL357075.1-201ENST00000404107 726 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 MTCO3P19-201ENST00000415864 321 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 RPS3P1-201ENST00000456781 192 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 RNA5SP341-201ENST00000516261 117 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 RNU6-764P-201ENST00000516396 105 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 RNU6-1198P-201ENST00000516904 67 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 AC026241.1-201ENST00000517873 2142 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 AC104695.3-201ENST00000604052 296 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 AC069294.1-201ENST00000608397 350 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 RMST_8.1-201ENST00000610287 165 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 AC138305.3-201ENST00000624988 240 ntBASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SYNPOQ8N3V7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 AC010329.5-201ENST00000623497 2174 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 MIR422A-201ENST00000362286 90 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 MIR184-201ENST00000384962 84 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 SNORA12-201ENST00000391162 147 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 Y_RNA.645-201ENST00000391229 102 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 AC017079.2-201ENST00000416102 485 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 RNU6-58P-201ENST00000517143 103 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 AC040926.1-201ENST00000530195 238 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 AC105245.1-201ENST00000581934 244 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYNPOQ8N3V7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 Y_RNA.133-201ENST00000363428 110 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 U3.9-201ENST00000363823 204 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 Y_RNA.455-201ENST00000384230 98 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 SNORA46.1-201ENST00000391069 153 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 RPL21P75-201ENST00000396599 483 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 RPL21P28-201ENST00000401418 483 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 RPL21P39-201ENST00000463605 483 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AC090515.1-201ENST00000465295 476 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AC087190.1-201ENST00000484462 480 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AC107032.1-201ENST00000485945 480 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AC132942.1-201ENST00000486753 483 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AC093591.1-201ENST00000491435 481 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 RPL21P16-201ENST00000495531 483 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 RNU6-1114P-201ENST00000516022 107 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 RNU6-475P-201ENST00000516073 104 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 SNORA40.14-201ENST00000516543 86 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 Y_RNA.720-201ENST00000517166 92 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 Y_RNA.721-201ENST00000517207 102 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AC027288.2-201ENST00000553028 243 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 AC093732.2-201ENST00000607950 274 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SYNPOQ8N3V7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 AC068647.1-201ENST00000489539 2265 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 RNU6-708P-201ENST00000384217 107 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 RNU6-1105P-201ENST00000384774 107 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 RNU6-985P-201ENST00000410182 104 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 RN7SKP220-201ENST00000410611 288 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 DPH3P2-201ENST00000422618 250 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 RPL23AP22-201ENST00000437556 453 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 AC112492.4-201ENST00000456549 352 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 UBE2DNL-203ENST00000474922 222 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 AC103975.1-201ENST00000482506 483 ntBASIC3.39□□□□□ -1.87
SYNPOQ8N3V7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms