Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU6-1037P-201ENST00000459571 107 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 RN7SL75P-201ENST00000461926 281 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 RPS29P27-201ENST00000463711 170 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 AC133134.1-201ENST00000466800 359 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 RPL39P38-201ENST00000467018 153 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.43□□□□□ -1.86
SYNE4Q8N205 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNE4Q8N205 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.43□□□□□ -1.86
SYNE4Q8N205 RNA5SP165-201ENST00000517142 115 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 AC034114.1-201ENST00000520293 285 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 ZNF192P1-203ENST00000565888 810 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 AL390123.1-201ENST00000603216 237 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 AL161629.2-201ENST00000615347 275 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 GABRG2-229ENST00000641017 3628 ntBASIC3.43□□□□□ -1.86
SYNE4Q8N205 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE4Q8N205 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SYNE4Q8N205 RNU4-50P-201ENST00000364361 141 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 MIR181A2-201ENST00000384863 110 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 MIR512-1-201ENST00000384913 84 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 MIR10A-201ENST00000385043 110 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 SAR1AP2-201ENST00000392696 594 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 Y_RNA.623-201ENST00000411128 95 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 AC139712.2-201ENST00000424302 339 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.42□□□□□ -1.86
SYNE4Q8N205 RPL23AP22-201ENST00000437556 453 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 HMGB3P8-201ENST00000449709 577 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 UQCRHP3-201ENST00000451503 251 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 AC003982.1-202ENST00000469928 248 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 TRBVB-201ENST00000477100 408 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 GZMAP1-201ENST00000503054 631 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 RNU6-1231P-201ENST00000517185 103 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 AC009318.2-201ENST00000610917 651 ntBASIC3.42□□□□□ -1.86
SYNE4Q8N205 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.42□□□□□ -1.86
SYNE4Q8N205 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
SYNE4Q8N205 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNE4Q8N205 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SYNE4Q8N205 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNE4Q8N205 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SYNE4Q8N205 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SYNE4Q8N205 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYNE4Q8N205 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
SYNE4Q8N205 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYNE4Q8N205 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
SYNE4Q8N205 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.41□□□□□ -1.86
SYNE4Q8N205 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.41□□□□□ -1.86
SYNE4Q8N205 MIR412-201ENST00000362142 91 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 snoU2_19.2-201ENST00000363024 80 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 SNORD27-201ENST00000363981 72 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 SNORA69.1-201ENST00000390904 137 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 MTND5P15-201ENST00000434246 349 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 RPS29P6-201ENST00000438196 145 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNE4Q8N205 RN7SKP43-201ENST00000516173 320 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 AC144568.1-201ENST00000520139 137 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.41□□□□□ -1.86
SYNE4Q8N205 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.41□□□□□ -1.86
SYNE4Q8N205 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 MIR8076-201ENST00000611401 83 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 XIST_intron.1-201ENST00000619444 68 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 AC006111.3-201ENST00000622137 383 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 AC027309.3-201ENST00000623419 351 ntBASIC3.41□□□□□ -1.86
SYNE4Q8N205 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SYNE4Q8N205 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.4□□□□□ -1.86
SYNE4Q8N205 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.4□□□□□ -1.86
SYNE4Q8N205 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SYNE4Q8N205 AC090740.1-201ENST00000623193 2262 ntBASIC3.4□□□□□ -1.86
SYNE4Q8N205 Y_RNA.84-201ENST00000363011 104 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SYNE4Q8N205 Y_RNA.458-201ENST00000384240 102 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 RNU6-611P-201ENST00000384276 104 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 RNU6-166P-201ENST00000384371 107 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 RNU6-140P-201ENST00000384566 108 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 MIR628-201ENST00000385229 95 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SYNE4Q8N205 RNU6-1203P-201ENST00000410703 110 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 RNU2-25P-201ENST00000411041 191 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 AL590135.1-201ENST00000422215 156 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 SNRPEP9-201ENST00000436794 238 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.4□□□□□ -1.87
SYNE4Q8N205 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.4□□□□□ -1.87
SYNE4Q8N205 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.4□□□□□ -1.87
SYNE4Q8N205 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.4□□□□□ -1.87
SYNE4Q8N205 RNU1-61P-201ENST00000516107 151 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 Y_RNA.676-201ENST00000516393 96 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 RNU6-612P-201ENST00000516909 102 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 SNORA31.21-201ENST00000517180 77 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 AP002770.2-201ENST00000543613 532 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 AC136932.1-201ENST00000574771 208 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 ZNF861P-201ENST00000588126 639 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.4□□□□□ -1.87
SYNE4Q8N205 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SYNE4Q8N205 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SYNE4Q8N205 AC093831.2-201ENST00000624393 3427 ntBASIC3.4□□□□□ -1.87
SYNE4Q8N205 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
SYNE4Q8N205 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SYNE4Q8N205 AC091152.2-201ENST00000591628 2569 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SYNE4Q8N205 Y_RNA.237-201ENST00000364439 102 ntBASIC3.39□□□□□ -1.87
SYNE4Q8N205 RNU6-338P-201ENST00000383888 105 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms