Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 MRPL35P1-201ENST00000404272 572 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 RPL31P3-201ENST00000458430 332 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 TRBVB-201ENST00000477100 408 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 SCARNA1-201ENST00000517138 166 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 EIF4A1P12-201ENST00000551910 141 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 MTND4LP25-201ENST00000570218 163 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 HMGN1P30-201ENST00000589286 268 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 AL022345.2-201ENST00000606307 135 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 AL365434.2-201ENST00000607979 234 ntBASIC0.63□□□□□ -2.31
ARHGEF28Q8N1W1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 RNU6-862P-201ENST00000362804 105 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 SNORD56.1-201ENST00000362913 68 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 RNU6-960P-201ENST00000364056 120 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 RNU1-96P-201ENST00000364163 162 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 MIR194-1-201ENST00000384892 85 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 RNU6-1176P-201ENST00000390955 107 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 PIGPP2-201ENST00000411569 458 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 RPL23AP30-201ENST00000432419 501 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 SCARNA16.2-201ENST00000516520 172 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 CENPUP1-201ENST00000526649 1202 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 AC069114.2-201ENST00000604699 304 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 AC084824.5-201ENST00000612009 413 ntBASIC0.62□□□□□ -2.31
ARHGEF28Q8N1W1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 snoU13.30-201ENST00000458951 104 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 snoU13.27-201ENST00000459278 104 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 Y_RNA.687-201ENST00000516558 91 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 SNORA43.2-201ENST00000516652 128 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC109446.1-201ENST00000566172 220 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC136932.1-201ENST00000574771 208 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC018889.1-201ENST00000605372 397 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 BX284668.6-201ENST00000606899 438 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AL356596.1-201ENST00000624230 379 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 SNORA75B-201ENST00000384053 137 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 MIR544A-201ENST00000384855 91 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 MIR10A-201ENST00000385043 110 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AL122001.1-201ENST00000457027 370 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 MTCO3P28-201ENST00000513351 515 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 MIR3146-201ENST00000580367 79 ntBASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.61□□□□□ -2.31
ARHGEF28Q8N1W1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 SNORA12-201ENST00000391162 147 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 RPS3AP36-201ENST00000398190 775 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 MTCO1P21-201ENST00000416634 589 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 MTND4P20-201ENST00000424125 869 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 USP9YP11-201ENST00000427537 717 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AL669831.1-202ENST00000428504 417 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AL591043.1-201ENST00000432461 424 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AC069257.2-201ENST00000441819 155 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AC119751.4-201ENST00000507498 357 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AC115990.1-201ENST00000526957 301 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AC068587.4-201ENST00000533893 186 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AC004492.1-201ENST00000607036 742 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AC072039.2-201ENST00000608883 439 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AC131235.4-201ENST00000609288 620 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AL512506.1-201ENST00000613918 449 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 FAM157A-202ENST00000615155 405 ntBASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.6□□□□□ -2.31
ARHGEF28Q8N1W1 AL159152.1-201ENST00000635019 2587 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 Y_RNA.132-201ENST00000363421 102 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 RPS26P45-201ENST00000471748 340 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 MTCO3P9-201ENST00000506989 781 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 MTND3P5-201ENST00000512798 333 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 AL596327.1-201ENST00000603629 213 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 RNU6-1192P-201ENST00000612197 107 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 RNU6-489P-201ENST00000618289 107 ntBASIC0.59□□□□□ -2.31
ARHGEF28Q8N1W1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.59□□□□□ -2.32
ARHGEF28Q8N1W1 RNU6-527P-201ENST00000363425 104 ntBASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 RNU6-723P-201ENST00000383973 107 ntBASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 SNORD116-12-201ENST00000384468 92 ntBASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 PIGFP2-201ENST00000421400 651 ntBASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 AC112206.3-201ENST00000514578 389 ntBASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 AC091163.3-201ENST00000518269 1144 ntBASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.58□□□□□ -2.32
ARHGEF28Q8N1W1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms