Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CYP2C61P-201ENST00000604072 290 ntBASIC1.6□□□□□ -2.15
CCDC50Q8IVM0 AL354950.2-201ENST00000617939 290 ntBASIC1.6□□□□□ -2.15
CCDC50Q8IVM0 AC022513.1-201ENST00000624512 117 ntBASIC1.6□□□□□ -2.15
CCDC50Q8IVM0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC50Q8IVM0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CCDC50Q8IVM0 MIR340-201ENST00000362125 95 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 RNU1-42P-201ENST00000364033 160 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 RNU6-996P-201ENST00000365438 107 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 Y_RNA.359-201ENST00000365498 102 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 RNU6-26P-201ENST00000383985 107 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 RNU6-378P-201ENST00000384324 107 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 SNORA12.2-201ENST00000391040 156 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 RNA5SP201-201ENST00000410316 124 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 RNA5SP100-201ENST00000410903 110 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 RNA5SP59-201ENST00000410922 110 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 EIF4EP2-201ENST00000422816 654 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 SNRPEP8-201ENST00000442866 260 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 AC010095.1-201ENST00000443543 144 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 RNU7-63P-201ENST00000459054 62 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 snoU13.15-201ENST00000459407 104 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 AP000889.1-201ENST00000530968 660 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 MIR3945-201ENST00000581853 98 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 AC130454.1-201ENST00000622948 401 ntBASIC1.59□□□□□ -2.15
CCDC50Q8IVM0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC50Q8IVM0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
CCDC50Q8IVM0 MTND4P14-201ENST00000435799 1354 ntBASIC1.59□□□□□ -2.16
CCDC50Q8IVM0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CCDC50Q8IVM0 AC245060.5-201ENST00000610778 3293 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 Y_RNA.332-201ENST00000365271 113 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RNU6-439P-201ENST00000384188 106 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 Y_RNA.504-201ENST00000384481 104 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RNU6-160P-201ENST00000384591 107 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 MIR320A-201ENST00000385302 82 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 SNORA48.1-201ENST00000390879 135 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 MTCYBP2-201ENST00000407745 171 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AL357139.1-201ENST00000407792 426 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RN7SKP61-201ENST00000410642 295 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RNU2-41P-201ENST00000410991 178 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AC009310.1-201ENST00000414414 451 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RPL23AP95-201ENST00000426806 265 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 snoU13.26-201ENST00000459452 105 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AC130509.1-201ENST00000464158 433 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RN7SL429P-201ENST00000479090 223 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RN7SL489P-201ENST00000486185 223 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RN7SL327P-201ENST00000488659 223 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AC008834.1-201ENST00000511612 175 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AC090115.3-201ENST00000553218 849 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 VN1R107P-201ENST00000601784 209 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AC025811.1-201ENST00000604312 472 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AP001836.1-201ENST00000604675 523 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 U2.17-201ENST00000611454 95 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 HULC.1-201ENST00000612720 240 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RN7SL853P-201ENST00000617250 223 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AC008147.4-201ENST00000617570 1204 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 U1.36-201ENST00000620684 176 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 SNORA43.4-201ENST00000629559 138 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 AP000560.1-201ENST00000624150 1937 ntBASIC1.58□□□□□ -2.16
CCDC50Q8IVM0 RNU1-62P-201ENST00000362599 164 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 RNA5SP219-201ENST00000390940 113 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AL513185.2-201ENST00000425543 193 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AC078809.1-201ENST00000427601 140 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AC073464.1-201ENST00000429823 534 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AL133396.1-201ENST00000432048 687 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AL121601.2-201ENST00000438019 707 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AL035666.1-201ENST00000446195 348 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 FTH1P25-201ENST00000447665 469 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AMD1P1-201ENST00000457220 922 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 RNU6-333P-201ENST00000459117 107 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC50Q8IVM0 AC021146.2-201ENST00000504736 556 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms