Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 Z98742.2-201ENST00000431564 187 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 AP000705.1-201ENST00000454567 350 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 RPS3P1-201ENST00000456781 192 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 SNORD105B-201ENST00000458770 79 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 AC007215.1-201ENST00000464893 276 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 AL121594.1-201ENST00000475906 575 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 UBL5P4-201ENST00000562584 236 ntBASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.08□□□□□ -1.76
NPAS4Q8IUM7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AC099654.7-201ENST00000635788 2127 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 RNU6-281P-201ENST00000384212 103 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 SNORD63-201ENST00000384262 68 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 RNU4-30P-201ENST00000410245 143 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AIMP1P2-201ENST00000425294 312 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 CYCSP35-201ENST00000451978 304 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AC025554.1-201ENST00000505641 188 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 SCARNA11.3-201ENST00000517276 130 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AC103810.1-201ENST00000579873 453 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 SNORA62.6-201ENST00000606322 83 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AC010999.1-201ENST00000611856 324 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AL590240.4-201ENST00000616908 390 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 BX322639.1-202ENST00000423987 2213 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 AP001486.2-201ENST00000561652 5113 ntBASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPAS4Q8IUM7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 ZNF204P-201ENST00000416749 2397 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 Y_RNA.40-201ENST00000362645 93 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 U3.9-201ENST00000363823 204 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 RNU6-873P-201ENST00000363833 107 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 RNU6-704P-201ENST00000364162 103 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 RNVU1-14-201ENST00000384770 164 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 MIR613-201ENST00000385248 95 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 RNA5SP213-201ENST00000391031 106 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 HLFP1-201ENST00000402375 499 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 Y_RNA.595-201ENST00000410403 105 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 AL451074.5-201ENST00000415894 435 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 RAC1P5-201ENST00000512182 576 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 MRPS36P2-201ENST00000512569 299 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 MTND5P41-201ENST00000517498 206 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 MIR3200-201ENST00000580767 85 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 AC072026.1-201ENST00000605023 201 ntBASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.06□□□□□ -1.76
NPAS4Q8IUM7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 ZNF962P-201ENST00000443465 3140 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 Y_RNA.8-201ENST00000362353 102 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 RNU6-318P-201ENST00000384283 103 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 RNU6-804P-201ENST00000384286 107 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 SNORA53-201ENST00000391141 249 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 RNU6-1001P-201ENST00000411265 100 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 AL159169.1-201ENST00000421119 127 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 AC005002.2-201ENST00000438228 269 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 RPS29P12-201ENST00000460178 152 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 SEM1P1-201ENST00000506694 209 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 RAC1P2-201ENST00000511164 579 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 Y_RNA.662-201ENST00000516028 97 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 RNU7-200P-201ENST00000516105 62 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 RNU2-31P-201ENST00000516954 155 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 MIR5195-201ENST00000583555 115 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 AL162424.1-201ENST00000602325 221 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 MAPK10-322ENST00000641485 4530 ntBASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS4Q8IUM7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms