Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PTP4A1P4-201ENST00000512479 322 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
LDB1Q86U70 AC046134.1-201ENST00000514454 666 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 RNU1-104P-201ENST00000517280 175 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.3□□□□□ -2.04
LDB1Q86U70 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB1Q86U70 MYL12BP1-201ENST00000569826 507 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.3□□□□□ -2.04
LDB1Q86U70 MIR3923-201ENST00000579521 83 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LDB1Q86U70 MIR3976-201ENST00000606807 139 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.3□□□□□ -2.04
LDB1Q86U70 AC063943.3-201ENST00000615562 356 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 AL450472.1-202ENST00000637286 180 ntBASIC2.3□□□□□ -2.04
LDB1Q86U70 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LDB1Q86U70 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LDB1Q86U70 AC080100.1-201ENST00000624239 5356 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.29□□□□□ -2.04
LDB1Q86U70 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LDB1Q86U70 RNU4-82P-201ENST00000362443 140 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 Y_RNA.123-201ENST00000363338 102 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 RNU6-944P-201ENST00000364023 107 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LDB1Q86U70 RNU6-767P-201ENST00000384132 107 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 MIR517A-201ENST00000385001 87 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LDB1Q86U70 Y_RNA.597-201ENST00000410463 100 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.29□□□□□ -2.04
LDB1Q86U70 CBX3P6-201ENST00000430257 527 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 DAP3P1-201ENST00000441522 278 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 AL353572.1-201ENST00000442490 417 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 AC145146.1-201ENST00000496370 254 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.29□□□□□ -2.04
LDB1Q86U70 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.29□□□□□ -2.04
LDB1Q86U70 AP005639.2-201ENST00000527592 928 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.29□□□□□ -2.04
LDB1Q86U70 AC018630.3-201ENST00000542637 96 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.29□□□□□ -2.04
LDB1Q86U70 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.29□□□□□ -2.04
LDB1Q86U70 POLR3GP2-201ENST00000588366 668 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 AL078605.1-201ENST00000603529 500 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 RBM11P1-201ENST00000604951 799 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 AC124303.1-201ENST00000605703 360 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 AC019193.3-201ENST00000609144 554 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 CTSLP2-204ENST00000629029 392 ntBASIC2.29□□□□□ -2.04
LDB1Q86U70 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.29□□□□□ -2.04
LDB1Q86U70 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LDB1Q86U70 Y_RNA.279-201ENST00000364763 95 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 SNORA25B-201ENST00000365507 128 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 RNU6-546P-201ENST00000383991 107 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 RNU1-52P-201ENST00000384190 164 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 RNU6-784P-201ENST00000384330 106 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
LDB1Q86U70 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
LDB1Q86U70 RNU2-32P-201ENST00000411193 191 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 AC007064.1-201ENST00000412238 351 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.28□□□□□ -2.04
LDB1Q86U70 MTND1P17-201ENST00000448961 204 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.28□□□□□ -2.04
LDB1Q86U70 AC068781.1-201ENST00000488231 618 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.28□□□□□ -2.04
LDB1Q86U70 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.28□□□□□ -2.04
LDB1Q86U70 RPL23AP94-201ENST00000512518 302 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.28□□□□□ -2.04
LDB1Q86U70 RNA5SP281-201ENST00000516504 135 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 RNA5SP402-201ENST00000517148 110 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.28□□□□□ -2.04
LDB1Q86U70 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.28□□□□□ -2.04
LDB1Q86U70 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
LDB1Q86U70 CYCSP26-201ENST00000534107 320 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 CYP4A27P-201ENST00000567218 190 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 MIR4790-201ENST00000577799 79 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 FGF7P1-201ENST00000582820 288 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 Z98751.3-201ENST00000604447 521 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 AL161423.1-201ENST00000613700 262 ntBASIC2.28□□□□□ -2.04
LDB1Q86U70 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
LDB1Q86U70 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LDB1Q86U70 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LDB1Q86U70 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LDB1Q86U70 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LDB1Q86U70 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LDB1Q86U70 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LDB1Q86U70 RNU6-1283P-201ENST00000365314 105 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 XGY1-201ENST00000381172 446 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 RNU6-1286P-201ENST00000383871 107 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 RNU1-148P-201ENST00000384472 162 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 SNORA67.4-201ENST00000384688 142 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LDB1Q86U70 MTCYBP2-201ENST00000407745 171 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 RN7SKP32-201ENST00000410167 303 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 RPL21P111-201ENST00000418453 477 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.27□□□□□ -2.05
LDB1Q86U70 AC012306.1-201ENST00000423267 114 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.27□□□□□ -2.05
LDB1Q86U70 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.27□□□□□ -2.05
LDB1Q86U70 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.27□□□□□ -2.05
LDB1Q86U70 AC018868.1-201ENST00000491307 315 ntBASIC2.27□□□□□ -2.05
LDB1Q86U70 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
LDB1Q86U70 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms