Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 RNU6-799P-201ENST00000363567 107 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 SNORA80A-201ENST00000363922 136 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 CD24P4-201ENST00000382840 243 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 CYCSP48-201ENST00000417124 323 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 AC073910.1-201ENST00000445047 438 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 OSTCP8-201ENST00000445117 448 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 RNU5F-2P-201ENST00000516066 82 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 MIR2355-201ENST00000517199 87 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 AC107934.2-201ENST00000518653 310 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
DDX53Q86TM3 AP002770.2-201ENST00000543613 532 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 AC027288.2-201ENST00000553028 243 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 MIR2682-201ENST00000580305 110 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 AC093732.2-201ENST00000607950 274 ntBASIC3.45□□□□□ -1.86
DDX53Q86TM3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
DDX53Q86TM3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.45□□□□□ -1.86
DDX53Q86TM3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX53Q86TM3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX53Q86TM3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX53Q86TM3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
DDX53Q86TM3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX53Q86TM3 RNU1-76P-201ENST00000362903 159 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 RNU6-1159P-201ENST00000362933 107 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 Y_RNA.319-201ENST00000365138 92 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 SNORA7.4-201ENST00000384249 137 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 SNORA44-201ENST00000384584 132 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 RPL21P1-201ENST00000399532 476 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 MIR1289-1-201ENST00000408836 144 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 AL445305.1-201ENST00000432577 575 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 DYNLT3P2-201ENST00000442517 295 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 RPS4XP2-201ENST00000458402 793 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 RPL36AP48-201ENST00000485521 314 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 AC010469.2-201ENST00000496412 480 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX53Q86TM3 RAC1P5-201ENST00000512182 576 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 SNORA25.11-201ENST00000515935 105 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 SNORA31.6-201ENST00000516241 130 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 AC034114.1-201ENST00000520293 285 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 AC022080.3-201ENST00000544433 482 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX53Q86TM3 uc_338.14-201ENST00000613162 166 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 UCA1.1-201ENST00000620952 75 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 U6.92-201ENST00000636464 89 ntBASIC3.44□□□□□ -1.86
DDX53Q86TM3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DDX53Q86TM3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX53Q86TM3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX53Q86TM3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 Y_RNA.452-201ENST00000384202 108 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 ELOCP20-201ENST00000422460 345 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 Z98742.2-201ENST00000431564 187 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 RPEP5-201ENST00000441137 268 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 RN7SL330P-201ENST00000469709 307 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 HMGB1P35-201ENST00000503360 598 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 MRPS36P2-201ENST00000512569 299 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 RNU6-1114P-201ENST00000516022 107 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 RNU6-567P-201ENST00000516746 107 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 AL161670.1-201ENST00000554348 137 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 UBL5P4-201ENST00000562584 236 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 MIR3136-201ENST00000583498 78 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 AC073410.2-201ENST00000603240 332 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 AL109809.4-201ENST00000603520 2185 ntBASIC3.43□□□□□ -1.86
DDX53Q86TM3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DDX53Q86TM3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX53Q86TM3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DDX53Q86TM3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
DDX53Q86TM3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX53Q86TM3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
DDX53Q86TM3 Y_RNA.214-201ENST00000364201 112 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 RNU6-879P-201ENST00000364328 108 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 RNY3P4-201ENST00000384428 101 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 MIR186-201ENST00000384988 86 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 RNU1-139P-201ENST00000391307 165 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 AL356968.1-201ENST00000416622 474 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 AIMP1P2-201ENST00000425294 312 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 EIF1P2-201ENST00000428233 350 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 WARS2P1-201ENST00000429678 537 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.42□□□□□ -1.86
DDX53Q86TM3 RNU6-897P-201ENST00000517135 105 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 RNU6-58P-201ENST00000517143 103 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
DDX53Q86TM3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX53Q86TM3 MIR3186-201ENST00000577404 85 ntBASIC3.42□□□□□ -1.86
DDX53Q86TM3 UBL5P2-201ENST00000583788 219 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms