Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC006548.1-201ENST00000427470 102 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 TIMM9P1-201ENST00000436122 256 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AC023050.3-201ENST00000541142 333 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.75□□□□□ -2.53
VPS13CQ709C8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.75□□□□□ -2.53
VPS13CQ709C8 MIR6755-201ENST00000619993 66 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 CR381572.1-201ENST00000625098 102 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 RNU6-263P-201ENST00000363811 107 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 MRPS17P3-201ENST00000465453 385 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC087481.2-201ENST00000565492 330 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.76□□□□□ -2.53
VPS13CQ709C8 Y_RNA.245-201ENST00000364493 95 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13CQ709C8 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC130509.1-201ENST00000464158 433 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC116562.3-201ENST00000506136 177 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AL138713.1-201ENST00000624026 2130 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 RNU4-46P-201ENST00000410818 138 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.76□□□□□ -2.53
VPS13CQ709C8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC004908.3-201ENST00000610248 625 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 AC136475.10-201ENST00000620253 385 ntBASIC-0.76□□□□□ -2.53
VPS13CQ709C8 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 CBX3P9-201ENST00000402326 552 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 RNA5SP504-201ENST00000410676 117 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 AC109445.1-201ENST00000512356 383 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 MIR4499-201ENST00000584834 69 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 AC004775.1-201ENST00000607389 753 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 uc_338.19-201ENST00000616808 99 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 RNA5SP259-201ENST00000365541 109 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.77□□□□□ -2.53
VPS13CQ709C8 AC010460.2-201ENST00000509054 677 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.77□□□□□ -2.53
VPS13CQ709C8 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 MIR101-2-201ENST00000362195 79 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 C1DP2-201ENST00000418167 426 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.77□□□□□ -2.53
VPS13CQ709C8 C1DP4-201ENST00000455429 424 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 MTCO2P18-201ENST00000457151 658 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 AC104985.3-201ENST00000623479 597 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 AC097372.4-201ENST00000625025 466 ntBASIC-0.77□□□□□ -2.53
VPS13CQ709C8 RPL31P53-201ENST00000457065 348 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC-0.78□□□□□ -2.53
VPS13CQ709C8 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 AC009268.2-201ENST00000621925 457 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 AC069257.2-201ENST00000441819 155 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 RNU6-881P-201ENST00000516813 102 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 RNU6-270P-201ENST00000364131 105 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC-0.78□□□□□ -2.53
VPS13CQ709C8 RNA5SP269-201ENST00000459032 137 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.78□□□□□ -2.53
VPS13CQ709C8 SSR1P2-201ENST00000415208 787 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.79□□□□□ -2.54
VPS13CQ709C8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.79□□□□□ -2.54
VPS13CQ709C8 SNORD114-25-201ENST00000363742 72 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 MTND2P21-201ENST00000436242 1042 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 RNU6-798P-201ENST00000516912 103 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 AC126365.2-201ENST00000580630 379 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 AL583856.2-201ENST00000606298 543 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 MIR6828-201ENST00000636181 60 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 SNORA80D-201ENST00000384488 135 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.79□□□□□ -2.54
VPS13CQ709C8 RAC1P7-201ENST00000445367 377 ntBASIC-0.79□□□□□ -2.54
VPS13CQ709C8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.79□□□□□ -2.54
VPS13CQ709C8 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.79□□□□□ -2.54
VPS13CQ709C8 EXOSC3P1-201ENST00000448649 500 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 AF038458.1-201ENST00000588406 262 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.8□□□□□ -2.54
VPS13CQ709C8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.8□□□□□ -2.54
VPS13CQ709C8 RNU6-1249P-201ENST00000363237 111 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 SNORD105-201ENST00000386910 85 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.8□□□□□ -2.54
VPS13CQ709C8 RPL23AP50-201ENST00000434149 455 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 AC006026.2-201ENST00000457376 180 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
VPS13CQ709C8 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 MTCO2P31-201ENST00000402702 684 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 RNA5SP111-201ENST00000411386 101 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 AL133396.1-201ENST00000432048 687 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 LARP7P4-201ENST00000481075 878 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 RNA5SP216-201ENST00000516111 123 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.8□□□□□ -2.54
VPS13CQ709C8 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 AC119751.3-201ENST00000399720 670 ntBASIC-0.81□□□□□ -2.54
VPS13CQ709C8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.81□□□□□ -2.54
VPS13CQ709C8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.81□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms