Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AP000654.2-201ENST00000605633 586 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 SNORD98-201ENST00000636377 67 ntBASIC2.11□□□□□ -2.07
NHLRC1Q6VVB1 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 Y_RNA.160-201ENST00000363677 92 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 RNY3P3-201ENST00000363816 102 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-1068P-201ENST00000410958 103 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 UBE2V1P7-201ENST00000446395 340 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 AC018710.1-201ENST00000506509 158 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-1281P-201ENST00000516223 105 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 SNORD60.2-201ENST00000516883 86 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 TRAV32-201ENST00000553993 340 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 AC103996.1-201ENST00000555468 102 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 ANP32BP3-201ENST00000559213 706 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 MIR3923-201ENST00000579521 83 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 AC092747.3-201ENST00000603769 301 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 AC103705.1-201ENST00000619013 241 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 AL359697.1-201ENST00000624879 587 ntBASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 FER-210ENST00000628534 558 ntTSL 5 BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.1□□□□□ -2.07
NHLRC1Q6VVB1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 CBX3P1-201ENST00000325243 554 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 BTF3L4P2-201ENST00000392798 346 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AL357139.1-201ENST00000407792 426 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 MIR1261-201ENST00000408659 82 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 RPL21P111-201ENST00000418453 477 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 PDCL2P1-201ENST00000419302 352 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AL590135.1-201ENST00000422215 156 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AC019205.3-201ENST00000424573 156 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 WARS2P1-201ENST00000429678 537 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AC016700.2-201ENST00000446011 156 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 U8.21-201ENST00000459536 136 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AC018868.1-201ENST00000491307 315 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AC015911.1-201ENST00000495111 156 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AF235103.2-201ENST00000525753 346 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AC021231.3-201ENST00000558497 370 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 MIR5583-1-201ENST00000580941 59 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AL162413.1-201ENST00000603198 110 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AL136221.1-201ENST00000621449 509 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 AC112487.2-201ENST00000637950 304 ntBASIC2.09□□□□□ -2.07
NHLRC1Q6VVB1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
NHLRC1Q6VVB1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 Y_RNA.86-201ENST00000363020 111 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 XGY1-201ENST00000381172 446 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 RNU6-214P-201ENST00000384130 107 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 RNU6-692P-201ENST00000384496 107 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 HMGN2P39-201ENST00000398005 273 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AL133396.1-201ENST00000432048 687 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AL513328.1-201ENST00000446460 224 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AL513124.1-201ENST00000450410 614 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 MTND3P10-201ENST00000450967 341 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 PMCHL2-203ENST00000457791 237 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 UBL5P3-201ENST00000475112 231 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 RPL21P99-201ENST00000480369 423 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 RN7SL636P-201ENST00000497504 294 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 SNORA19.2-201ENST00000516013 114 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 RNU6-323P-201ENST00000521915 107 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 MIR6840-201ENST00000611937 71 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AC006504.8-201ENST00000621046 635 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 ZNF658B-202ENST00000615961 3375 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 MTND4P29-201ENST00000503122 1372 ntBASIC2.08□□□□□ -2.08
NHLRC1Q6VVB1 AC006026.1-201ENST00000444025 1803 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 RNA5SP289-201ENST00000362332 137 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 SNORD114-30-201ENST00000364448 72 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 RNU4-20P-201ENST00000365601 151 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 Y_RNA.394-201ENST00000383942 103 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 Y_RNA.529-201ENST00000384586 119 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 EIF4E2P1-201ENST00000393781 255 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 AP000275.1-201ENST00000411943 390 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 EIF1AXP1-201ENST00000419267 435 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 SNAP23P1-201ENST00000433229 246 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.07□□□□□ -2.08
NHLRC1Q6VVB1 AC098614.3-201ENST00000438957 440 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms