Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.82□□□□□ -1.64
TRAF7Q6Q0C0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRAF7Q6Q0C0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 RNU1-100P-201ENST00000365255 165 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 Y_RNA.432-201ENST00000384087 111 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 MIR607-201ENST00000385241 96 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 RNU6-644P-201ENST00000391155 98 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 FTH1P6-201ENST00000430768 320 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 AC007969.2-201ENST00000441891 191 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 AC125388.1-201ENST00000459631 156 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 HSPE1P5-201ENST00000561489 272 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 MIR4429-201ENST00000580105 73 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 AC012468.1-201ENST00000604888 430 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 MIR92B-201ENST00000607575 96 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAF7Q6Q0C0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 MAPK10-320ENST00000641462 6696 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 Y_RNA.198-201ENST00000364013 98 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 RNU6-793P-201ENST00000384233 104 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AL117342.1-201ENST00000404861 406 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 RN7SKP61-201ENST00000410642 295 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AC078809.1-201ENST00000427601 140 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AL117339.2-201ENST00000430475 180 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AF228730.3-201ENST00000436691 102 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 RN7SKP46-201ENST00000515942 234 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 Vault.1-201ENST00000516474 102 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 SNORA67.7-201ENST00000516664 135 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AL137067.1-201ENST00000615933 120 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 AC091564.4-201ENST00000533934 2194 ntBASIC4.8□□□□□ -1.64
TRAF7Q6Q0C0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 Y_RNA.190-201ENST00000363964 101 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 RNU6-1280P-201ENST00000365211 107 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 RNA5SP151-201ENST00000365632 117 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AL359837.1-201ENST00000381357 287 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 SNORA48.5-201ENST00000391143 135 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AC096949.1-201ENST00000412047 152 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AL157831.1-201ENST00000426134 473 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AL021997.2-201ENST00000615674 271 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AC015914.2-201ENST00000618167 288 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AC034229.5-201ENST00000624258 185 ntBASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAF7Q6Q0C0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 RNU6-1099P-201ENST00000363533 107 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 RNU6-884P-201ENST00000363889 107 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 RNU4-36P-201ENST00000364294 144 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 Y_RNA.366-201ENST00000365540 102 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 RNA5SP171-201ENST00000391071 115 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 VDAC1P3-201ENST00000434069 851 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 RN7SL542P-201ENST00000467147 294 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 RNA5SP236-201ENST00000516169 116 ntBASIC4.78□□□□□ -1.64
TRAF7Q6Q0C0 RNU6-830P-201ENST00000516353 107 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms