Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 AC073901.1-201ENST00000462471 408 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 RN7SL594P-201ENST00000470590 287 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 RNU5F-8P-201ENST00000515941 111 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 SNORA25.14-201ENST00000516481 132 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 AC021231.3-201ENST00000558497 370 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 MIR5571-201ENST00000577998 113 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 AL359198.2-201ENST00000611836 194 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 AC022149.2-201ENST00000621061 203 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 AC127459.3-201ENST00000624328 466 ntBASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PRPF40BQ6NWY9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PRPF40BQ6NWY9 MIR411-201ENST00000362239 96 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-137P-201ENST00000363680 108 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-886P-201ENST00000384319 105 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 Y_RNA.569-201ENST00000384749 103 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 RNA5SP310-201ENST00000459084 116 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 AC117440.1-201ENST00000474107 571 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-58P-201ENST00000517143 103 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 SNORA31.23-201ENST00000517219 133 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 AK6P2-201ENST00000549020 471 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 MIR4643-201ENST00000577473 78 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 U7.8-201ENST00000619968 63 ntBASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF40BQ6NWY9 TNPO1P3-201ENST00000436471 2662 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 AC092268.1-201ENST00000342691 405 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 MIR422A-201ENST00000362286 90 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 SNORA36A-201ENST00000384221 132 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 SNORA1.3-201ENST00000384676 136 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 RNA5SP213-201ENST00000391031 106 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-159P-201ENST00000391080 106 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 RN7SKP61-201ENST00000410642 295 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 RNU4-47P-201ENST00000410876 114 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 AC099548.1-201ENST00000421443 426 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 snoU13.6-201ENST00000458785 104 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-789P-201ENST00000517105 102 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 AP002392.1-201ENST00000537692 208 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 AL162424.1-201ENST00000602325 221 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 MFSD8-233ENST00000641482 4860 ntBASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF40BQ6NWY9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 RNA5SP197-201ENST00000363357 119 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-281P-201ENST00000384212 103 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-378P-201ENST00000384324 107 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 MIR487A-201ENST00000385009 80 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AL031121.1-201ENST00000406553 254 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AL591034.1-201ENST00000407447 340 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AL390729.2-201ENST00000416137 156 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AC244670.1-201ENST00000436879 112 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AC025750.2-201ENST00000442609 450 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 HMGN2P10-201ENST00000448085 265 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AC006445.2-201ENST00000510061 472 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 Y_RNA.679-201ENST00000516416 91 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-567P-201ENST00000516746 107 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 IGHVIII-44-202ENST00000636235 289 ntBASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PRPF40BQ6NWY9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-626P-201ENST00000363354 107 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 RNU6-20P-201ENST00000384106 107 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 AL358075.3-201ENST00000426289 226 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 AC078809.1-201ENST00000427601 140 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 RPL39P29-201ENST00000447779 157 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 RPL30P12-201ENST00000474666 353 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 CKS1BP7-201ENST00000522230 235 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 HIGD1AP1-201ENST00000550979 275 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 MIR3609-201ENST00000582661 80 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 AL162713.1-201ENST00000604480 262 ntBASIC4.18□□□□□ -1.74
PRPF40BQ6NWY9 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms