Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AC106707.2-201ENST00000484182 374 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.57□□□□□ -1.84
E4F1Q66K89 AC093663.1-201ENST00000497190 394 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.57□□□□□ -1.84
E4F1Q66K89 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.57□□□□□ -1.84
E4F1Q66K89 AL109918.3-201ENST00000603072 338 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 AL078605.1-201ENST00000603529 500 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 U3.45-201ENST00000607547 219 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 AC006111.3-201ENST00000622137 383 ntBASIC3.57□□□□□ -1.84
E4F1Q66K89 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
E4F1Q66K89 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
E4F1Q66K89 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
E4F1Q66K89 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
E4F1Q66K89 AC002546.1-201ENST00000588041 2504 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
E4F1Q66K89 AC002543.1-201ENST00000299783 1954 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
E4F1Q66K89 RNU6-137P-201ENST00000363680 108 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 RNU6-873P-201ENST00000363833 107 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 Y_RNA.277-201ENST00000364754 102 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 Y_RNA.539-201ENST00000384635 107 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 MIR147B-201ENST00000390185 80 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 RNA5SP252-201ENST00000391131 119 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 PTMAP5-201ENST00000393073 333 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 AP000567.1-201ENST00000406413 156 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 MIR1193-201ENST00000408109 78 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 RNU4-30P-201ENST00000410245 143 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.56□□□□□ -1.84
E4F1Q66K89 AL441985.1-201ENST00000457727 251 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 RNU7-23P-201ENST00000459465 62 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.56□□□□□ -1.84
E4F1Q66K89 RNU6-496P-201ENST00000516145 99 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 SNORD19.2-201ENST00000516978 73 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 AC115990.1-201ENST00000526957 301 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.56□□□□□ -1.84
E4F1Q66K89 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.56□□□□□ -1.84
E4F1Q66K89 AC106785.1-201ENST00000565935 262 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 uc_338.1-201ENST00000612113 180 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 AL138880.2-201ENST00000616214 239 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 SNORD98-201ENST00000636377 67 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 AC012442.3-202ENST00000636742 206 ntBASIC3.56□□□□□ -1.84
E4F1Q66K89 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.56□□□□□ -1.84
E4F1Q66K89 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
E4F1Q66K89 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
E4F1Q66K89 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.55□□□□□ -1.84
E4F1Q66K89 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
E4F1Q66K89 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
E4F1Q66K89 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
E4F1Q66K89 RNU4-90P-201ENST00000362773 141 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 RNU6-1266P-201ENST00000362794 105 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 RNU6-280P-201ENST00000364145 104 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 RNU6-748P-201ENST00000384648 107 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 MIR549A-201ENST00000385268 96 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 RPL32P35-201ENST00000415214 394 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.55□□□□□ -1.84
E4F1Q66K89 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.55□□□□□ -1.84
E4F1Q66K89 RNU6-138P-201ENST00000515952 107 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.55□□□□□ -1.84
E4F1Q66K89 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.55□□□□□ -1.84
E4F1Q66K89 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.55□□□□□ -1.84
E4F1Q66K89 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.55□□□□□ -1.84
E4F1Q66K89 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
E4F1Q66K89 AC010889.1-201ENST00000566193 2666 ntBASIC3.55□□□□□ -1.84
E4F1Q66K89 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.55□□□□□ -1.84
E4F1Q66K89 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
E4F1Q66K89 ZNF204P-201ENST00000416749 2397 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
E4F1Q66K89 RNU4-56P-201ENST00000364700 142 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 RNU6-290P-201ENST00000365212 101 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 AL359837.1-201ENST00000381357 287 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 SNORD63-201ENST00000384262 68 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 RNU6-21P-201ENST00000384710 107 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 MIR329-1-201ENST00000385028 80 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
E4F1Q66K89 SNORA26.3-201ENST00000391119 136 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 SNORA57.1-201ENST00000391227 145 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 AL033519.2-201ENST00000403958 392 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 AC010095.1-201ENST00000443543 144 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 HSPE1P25-201ENST00000455484 251 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
E4F1Q66K89 RNU5B-3P-201ENST00000516601 115 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 RNU6-567P-201ENST00000516746 107 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 RNU7-110P-201ENST00000516891 62 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 RNA5SP54-201ENST00000516951 92 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.54□□□□□ -1.84
E4F1Q66K89 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 U6.98-201ENST00000637157 84 ntBASIC3.54□□□□□ -1.84
E4F1Q66K89 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.54□□□□□ -1.84
E4F1Q66K89 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
E4F1Q66K89 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
E4F1Q66K89 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
E4F1Q66K89 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
E4F1Q66K89 SNORD115-8-201ENST00000363856 82 ntBASIC3.53□□□□□ -1.84
E4F1Q66K89 RNU6-200P-201ENST00000364743 107 ntBASIC3.53□□□□□ -1.84
E4F1Q66K89 SNORD115-38-201ENST00000365037 82 ntBASIC3.53□□□□□ -1.84
E4F1Q66K89 Y_RNA.462-201ENST00000384268 102 ntBASIC3.53□□□□□ -1.84
E4F1Q66K89 MIR208B-201ENST00000401172 77 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms