Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 DEFB117-201ENST00000602356 141 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC002076.2-201ENST00000617362 122 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 AC018555.1-201ENST00000567548 1980 ntBASIC3.47□□□□□ -1.85
HLA-DQA1Q5Y7H0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.46□□□□□ -1.85
HLA-DQA1Q5Y7H0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC006504.1-201ENST00000562493 3666 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU4-56P-201ENST00000364700 142 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-211P-201ENST00000384047 107 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 CYCSP48-201ENST00000417124 323 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 OOSP1P1-201ENST00000423265 274 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL133162.1-201ENST00000463228 453 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU1-45P-201ENST00000517191 141 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 MTND5P41-201ENST00000517498 206 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC023632.4-201ENST00000517783 191 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 RPS15AP11-201ENST00000594193 385 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC005520.5-201ENST00000613926 164 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL365265.1-201ENST00000621045 234 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
HLA-DQA1Q5Y7H0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU1-62P-201ENST00000362599 164 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 SNORA18.3-201ENST00000384122 132 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-1310P-201ENST00000384153 107 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-198P-201ENST00000384258 104 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNA5SP475-201ENST00000410568 110 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 RPS29P26-201ENST00000477483 171 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 MIR3144-201ENST00000579460 79 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL356575.1-201ENST00000603008 283 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 SNRPGP20-201ENST00000604477 205 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL034555.1-201ENST00000604816 211 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 MIR486-1-201ENST00000612171 68 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC018692.3-201ENST00000623929 123 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 MIR3674-201ENST00000636576 68 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC132825.6-201ENST00000638861 357 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DQA1Q5Y7H0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 Y_RNA.262-201ENST00000364641 102 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL359837.1-201ENST00000381357 287 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 Y_RNA.415-201ENST00000384012 112 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-748P-201ENST00000384648 107 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU2-54P-201ENST00000410299 190 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-394P-201ENST00000410735 107 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC009963.1-201ENST00000417265 157 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 RPL32P34-201ENST00000486380 400 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 HMGB3P3-201ENST00000510526 400 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 SNORD19.2-201ENST00000516978 73 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC069200.1-201ENST00000609511 323 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC034229.5-201ENST00000624258 185 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 AP000553.6-201ENST00000641242 118 ntBASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1Q5Y7H0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL359854.1-201ENST00000614203 1594 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC010889.1-201ENST00000566193 2666 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 SNORA62.3-201ENST00000365110 153 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 MIR320B2-201ENST00000408479 138 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC245291.1-201ENST00000419501 328 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU7-200P-201ENST00000516105 62 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 RNU6-107P-201ENST00000516643 102 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 AP005660.1-201ENST00000522972 293 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 AC008011.1-201ENST00000545989 227 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 AL008718.3-201ENST00000610217 321 ntBASIC3.43□□□□□ -1.86
HLA-DQA1Q5Y7H0 PCGEM1.1-201ENST00000613431 131 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms