Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 SNORD44.1-201ENST00000363202 61 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 RNU6-514P-201ENST00000384208 107 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 MIR1305-201ENST00000408300 86 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 PDCL2P1-201ENST00000419302 352 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 AC060773.1-201ENST00000421698 310 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 AC002486.1-201ENST00000435098 391 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 MED28P2-201ENST00000475771 317 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 RNU6ATAC35P-201ENST00000609276 444 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 AC063943.3-201ENST00000615562 356 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 AL163051.2-201ENST00000618976 735 ntBASIC-0.13□□□□□ -2.43
NUP188Q5SRE5 MTND5P16-201ENST00000460269 1703 ntBASIC-0.14□□□□□ -2.43
NUP188Q5SRE5 RNA5SP264-201ENST00000363115 107 ntBASIC-0.14□□□□□ -2.43
NUP188Q5SRE5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.14□□□□□ -2.43
NUP188Q5SRE5 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.14□□□□□ -2.43
NUP188Q5SRE5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.14□□□□□ -2.43
NUP188Q5SRE5 RNA5SP227-201ENST00000516184 113 ntBASIC-0.14□□□□□ -2.43
NUP188Q5SRE5 AC107905.1-201ENST00000616204 426 ntBASIC-0.14□□□□□ -2.43
NUP188Q5SRE5 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 SNORA36.2-201ENST00000384004 127 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 MT-TQ-201ENST00000387372 72 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 RNA5SP219-201ENST00000390940 113 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 AL355796.1-201ENST00000406706 323 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 RNFT1P2-201ENST00000443064 757 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 snoU13.8-201ENST00000458890 104 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 RPF2P2-201ENST00000504693 896 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 MTND1P22-201ENST00000510572 951 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 MIR4709-201ENST00000577272 72 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 7SK.10-201ENST00000621414 298 ntBASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
NUP188Q5SRE5 RNU6-512P-201ENST00000364438 103 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 RNU6-359P-201ENST00000365466 108 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 MTCO2P31-201ENST00000402702 684 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 RAP1BP3-201ENST00000407180 549 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 MIR1468-201ENST00000410600 86 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 MTCO3P41-201ENST00000414801 328 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 MTCO3P45-201ENST00000443036 613 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 AC026410.2-201ENST00000460281 156 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 RNU6-760P-201ENST00000516078 97 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 AC011195.1-201ENST00000578177 177 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 MIR1264-201ENST00000616374 69 ntBASIC-0.16□□□□□ -2.43
NUP188Q5SRE5 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 RNU6-40P-201ENST00000384254 107 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 RNU6-114P-201ENST00000384704 105 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 RNA5SP504-201ENST00000410676 117 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 RAC1P6-201ENST00000423911 575 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 RAC1P8-201ENST00000427086 527 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 MTND2P33-201ENST00000506452 1031 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 HMGB1P28-201ENST00000507778 552 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 RNU6-885P-201ENST00000516607 104 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 AF038458.1-201ENST00000588406 262 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 AL358072.1-201ENST00000604156 575 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 AL390208.1-201ENST00000605885 644 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 AC093788.1-201ENST00000609356 927 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 AC073349.3-201ENST00000617616 186 ntBASIC-0.16□□□□□ -2.44
NUP188Q5SRE5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 RNU6-163P-201ENST00000384396 106 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 RNU6-843P-201ENST00000384454 104 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 RNA5SP222-201ENST00000411039 105 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 AL359704.1-201ENST00000411586 781 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 USP9YP14-201ENST00000430663 563 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 RNU7-21P-201ENST00000459430 62 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 HMGB1P30-201ENST00000492455 606 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 AC009902.1-201ENST00000519351 183 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 MIR4637-201ENST00000582405 84 ntBASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-0.17□□□□□ -2.44
NUP188Q5SRE5 MIRLET7D-201ENST00000362263 87 ntBASIC-0.18□□□□□ -2.44
NUP188Q5SRE5 RNU6-833P-201ENST00000363486 107 ntBASIC-0.18□□□□□ -2.44
NUP188Q5SRE5 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.18□□□□□ -2.44
NUP188Q5SRE5 VPS26BP1-201ENST00000417155 755 ntBASIC-0.18□□□□□ -2.44
NUP188Q5SRE5 AL139421.1-201ENST00000423010 169 ntBASIC-0.18□□□□□ -2.44
NUP188Q5SRE5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.18□□□□□ -2.44
NUP188Q5SRE5 DAP3P1-201ENST00000441522 278 ntBASIC-0.18□□□□□ -2.44
NUP188Q5SRE5 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.18□□□□□ -2.44
NUP188Q5SRE5 AC106038.2-201ENST00000520706 568 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms