Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 SNORA32.2-201ENST00000384049 122 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 RNA5SP201-201ENST00000410316 124 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 ISCA1P6-201ENST00000427740 390 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 AL596276.1-201ENST00000434465 418 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 MTND1P30-201ENST00000441241 901 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 RPS29P28-201ENST00000446439 141 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 AC245517.4-201ENST00000448601 281 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 MTCO3P7-201ENST00000510008 774 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 RNA5SP445-201ENST00000515889 115 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.08□□□□□ -2.24
ZNF404Q494X3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.08□□□□□ -2.24
ZNF404Q494X3 HMGB1P33-201ENST00000563485 527 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 VN1R107P-201ENST00000601784 209 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 AL359821.1-201ENST00000605519 182 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 AC027449.1-201ENST00000608890 407 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
ZNF404Q494X3 SEPT14P19-203ENST00000633205 211 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 MTND4P14-201ENST00000435799 1354 ntBASIC1.08□□□□□ -2.24
ZNF404Q494X3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ZNF404Q494X3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.07□□□□□ -2.24
ZNF404Q494X3 U3.9-201ENST00000363823 204 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 RNU6-74P-201ENST00000384235 107 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 RN7SKP61-201ENST00000410642 295 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 RNU4-46P-201ENST00000410818 138 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 RNU6-195P-201ENST00000411352 109 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.07□□□□□ -2.24
ZNF404Q494X3 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 AC078809.1-201ENST00000427601 140 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.07□□□□□ -2.24
ZNF404Q494X3 AL022238.1-201ENST00000442557 355 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.07□□□□□ -2.24
ZNF404Q494X3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.07□□□□□ -2.24
ZNF404Q494X3 AC013470.1-201ENST00000453438 462 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 RPL31P3-201ENST00000458430 332 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 RNU7-182P-201ENST00000459009 62 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 RPL26P26-201ENST00000480251 434 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 AP003072.2-201ENST00000527756 676 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.07□□□□□ -2.24
ZNF404Q494X3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.07□□□□□ -2.24
ZNF404Q494X3 ZNF321P-202ENST00000550843 495 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.07□□□□□ -2.24
ZNF404Q494X3 SNORA77B-201ENST00000578179 125 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 MIR3923-201ENST00000579521 83 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 MIR4775-201ENST00000581168 75 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 AC090616.2-202ENST00000584248 222 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 AC091805.2-201ENST00000603848 235 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 AC008945.2-201ENST00000606056 604 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
ZNF404Q494X3 MIR8063-201ENST00000621930 81 ntBASIC1.07□□□□□ -2.24
ZNF404Q494X3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ZNF404Q494X3 AC092268.1-201ENST00000342691 405 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 SNORD32A-201ENST00000364805 84 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 RNU6-1029P-201ENST00000384109 107 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 SNORD26-201ENST00000384147 75 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 Y_RNA.560-201ENST00000384689 102 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 MIR520A-201ENST00000384862 85 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 SNAP23P1-201ENST00000433229 246 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 HSPE1P9-201ENST00000440046 311 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 JTBP1-201ENST00000441314 247 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 AL031274.1-201ENST00000450334 232 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 RPS29P15-201ENST00000458329 171 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 RNA5SP269-201ENST00000459032 137 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 MTCO2P6-201ENST00000463134 685 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 RPL9P9-202ENST00000466501 579 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 RPS26P55-201ENST00000471178 356 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 RPL36AP21-201ENST00000490372 323 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 MTCO3P28-201ENST00000513351 515 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 RNU6-1129P-201ENST00000515964 104 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 SNORD27.1-201ENST00000516319 72 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 SNORD60.2-201ENST00000516883 86 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 RNU6-902P-201ENST00000517212 91 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 AC106038.2-201ENST00000520706 568 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.06□□□□□ -2.24
ZNF404Q494X3 AC234772.3-201ENST00000602277 528 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 AC069114.2-201ENST00000604699 304 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 AL356157.2-201ENST00000605122 111 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 MIR98-201ENST00000606724 119 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 AC022418.1-201ENST00000624118 445 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ZNF404Q494X3 ICE2P2-201ENST00000483823 2787 ntBASIC1.06□□□□□ -2.24
ZNF404Q494X3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC100821.1-201ENST00000523153 2479 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.05□□□□□ -2.24
ZNF404Q494X3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 RNU6-108P-201ENST00000365558 107 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 Y_RNA.480-201ENST00000384364 102 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 MIR1-2-201ENST00000384961 85 ntBASIC1.05□□□□□ -2.24
ZNF404Q494X3 SNORA12.2-201ENST00000391040 156 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms